RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TRAPPC9Q96Q05 1148 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 MRTO4Q9UKD2 239 aaKnown RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 ACTL7BQ9Y614 415 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 FPGTO14772 594 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 PSME3P61289 254 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 ZNF540Q8NDQ6 660 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 EEF1AKMT1Q8WVE0 214 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 SMPDL3BQ92485 455 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 SPAG4Q9NPE6 437 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 SLC35C2Q9NQQ7 365 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 CORO2BQ9UQ03 480 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 KHDRBS3O75525 346 aaKnown RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 TBC1D25Q3MII6 688 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 PHF19Q5T6S3 580 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 C9orf64Q5T6V5 341 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 CMC1Q7Z7K0 106 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 ACE2Q9BYF1 805 aaPredicted RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 LHX5Q9H2C1 402 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 EGFL7Q9UHF1 273 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 C2orf71A6NGG8 1288 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 B4DGG1 531 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 MFN2O95140 757 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 GNPDA1P46926 289 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 KCTD21Q4G0X4 260 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 EOGTQ5NDL2 527 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 RASGRP3Q8IV61 690 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 EIF1ADQ8N9N8 165 aaKnown RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 TEX47Q8TBZ9 253 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 P2RY11Q96G91 374 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 ANKRD27Q96NW4 1050 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 EBNA1BP2Q99848 306 aaKnown RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 PTPN18Q99952 460 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 ERVK-11Q9UQG0 969 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 STRCP1A6NGW2 1772 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 LRRC10BA6NIK2 292 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 EN2P19622 333 aaPredicted RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 TPP2P29144 1249 aaPredicted RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 CASP9P55211 416 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 ARMC3Q5W041 872 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 CAPN13Q6MZZ7 669 aaPredicted RBP14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 MZT2AQ6P582 158 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 ITCHQ96J02 903 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 AP3M1Q9Y2T2 418 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 PCDHGC5Q9Y5F6 944 aa14.15□□□□□ -0.14
PCDHA11-201ENST00000398640 FAM155BO75949 473 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ECDO95905 644 aaPredicted RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 FGF1P05230 155 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 AQP1P29972 269 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ARF5P84085 180 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 TNK2Q07912 1038 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 LIPMQ5VYY2 423 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 TXNDC11Q6PKC3 985 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ACDQ96AP0 544 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 BCO2Q9BYV7 579 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 FBXO5Q9UKT4 447 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 MYH2Q9UKX2 1941 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 MYBPHLA2RUH7 354 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 AZIN1O14977 448 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 PSMG1O95456 288 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ITGA2P17301 1181 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 CCNA2P20248 432 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 RPL3P39023 403 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 PTPN9P43378 593 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 PSMD4P55036 377 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 SEMG2Q02383 582 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 SAMHD1Q9Y3Z3 626 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 CHD4Q14839 1912 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 LIN7AO14910 233 aaPredicted RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 SLC6A2P23975 617 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ALDH4A1P30038 563 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 CDH4P55283 916 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 LSM12Q3MHD2 195 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 OR4K2Q8NGD2 314 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 LCN9Q8WX39 176 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 IRF7Q92985 503 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 SLC47A1Q96FL8 570 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 FGFBP2Q9BYJ0 223 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 MMADHCQ9H3L0 296 aaPredicted RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 TMEM138Q9NPI0 162 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ABCB8Q9NUT2 735 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 CNTN3Q9P232 1028 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 CST3P01034 146 aaPredicted RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ZNF132P52740 706 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 POU5F1Q01860 360 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 DLG2Q15700 870 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 PARP15Q460N3 678 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 LRRC38Q5VT99 294 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 MSANTD2Q6P1R3 559 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 IGSF21Q96ID5 467 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 QKIQ96PU8 341 aaKnown RBP eCLIP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 AIF1LQ9BQI0 150 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 PDCD10Q9BUL8 212 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ELAC1Q9H777 363 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 SNX10Q9Y5X0 201 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ADH5P11766 374 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 IL12RB1P42701 662 aa14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 EIF2B2P49770 351 aaKnown RBP14.14□□□□□ -0.15
PCDHA11-201ENST00000398640 ZNF490Q9ULM2 529 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms