RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 EVA1AQ9H8M9 152 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SEPT10Q9P0V9 454 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ENOPH1Q9UHY7 261 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GGT7Q9UJ14 662 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MED16Q9Y2X0 877 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MDC1Q14676 2089 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SMIM31A0A1B0GVY4 71 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 A0A1W2PPC1 479 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SDHDO14521 159 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 TULP3O75386 442 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ATP6V1G2O95670 118 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PTPRNQ16849 979 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 BORAQ6PGQ7 559 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GLT6D1Q7Z4J2 308 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CMTM8Q8IZV2 173 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 OXR1Q8N573 874 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 VN1R2Q8NFZ6 395 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MCOLN3Q8TDD5 553 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 REPS1Q96D71 796 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 C1QTNF7Q9BXJ2 289 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 BRD9Q9H8M2 597 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MPP6Q9NZW5 540 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 BMPR2Q13873 1038 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CYLC2Q14093 348 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF423Q2M1K9 1284 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RAB6CQ53S08 254 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GAREM2Q75VX8 874 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ETFBKMTQ8IXQ9 262 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ULK2Q8IYT8 1036 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 OR8J3Q8NGG0 315 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CD200R1Q8TD46 325 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MGARPQ8TDB4 240 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PMM1Q92871 262 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 TESCQ96BS2 214 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 VWCEQ96DN2 955 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MARK4Q96L34 752 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CADM1Q9BY67 442 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SLC13A1Q9BZW2 595 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RAB6CQ9H0N0 254 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 DENND2DQ9H6A0 471 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SPAG4Q9NPE6 437 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 LEF1Q9UJU2 399 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SLC4A7Q9Y6M7 1214 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 H0Y626 953 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 KIF1CO43896 1103 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 OR56A5P0C7T3 313 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PDAP1Q13442 181 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RAB30Q15771 203 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 HNRNPA1L2Q32P51 320 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CUZD1Q86UP6 607 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF784Q8NCA9 323 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RMDN1Q96DB5 314 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CELF6Q96J87 481 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SARGQ9BW04 601 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SCUBE2Q9NQ36 999 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 DDX18Q9NVP1 670 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MOCS2O96007 188 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 S100BP04271 92 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RPS24P62847 133 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ARF5P84085 180 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PLA2G4EQ3MJ16 856 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PAN2Q504Q3 1202 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PDCD4Q53EL6 469 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PPM1LQ5SGD2 360 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RNF219Q5W0B1 726 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 PSAPL1Q6NUJ1 521 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 FOXR1Q6PIV2 292 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 AGAP2Q99490 1192 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 RAB11FIP5Q9BXF6 653 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SLC12A9Q9BXP2 914 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GPR63Q9BZJ6 419 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SFXN1Q9H9B4 322 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CORO2BQ9UQ03 480 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MAN2B2Q9Y2E5 1009 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MRPL42Q9Y6G3 142 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 MRPS14O60783 128 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CNTN5O94779 1100 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 ANXA5P08758 320 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 CNPP09543 421 aaKnown RBP5.81□□□□□ -1.48
PTPRD-206ENST00000397617 NDUFS1P28331 727 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SCNN1BP51168 640 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 KCNQ1P51787 676 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 FCHO2Q0JRZ9 810 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 TRIM60Q495X7 471 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 DPPA4Q7L190 304 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 DENND6BQ8NEG7 585 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 VPS37AQ8NEZ2 397 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 OR4K2Q8NGD2 314 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GDAP1Q8TB36 358 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 BIRC8Q96P09 236 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 GSTO2Q9H4Y5 243 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 SLC25A13Q9UJS0 675 aa5.81□□□□□ -1.48
PTPRD-206ENST00000397617 A8MVJ9 347 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 ZNF701M0R085 212 aaPredicted RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 NRP2O60462 931 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 PEX11AO75192 247 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 SRP72O76094 671 aaKnown RBP5.8□□□□□ -1.48
PTPRD-206ENST00000397617 CD160O95971 181 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 GFAPP14136 432 aa5.8□□□□□ -1.48
PTPRD-206ENST00000397617 EPB42P16452 691 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms