RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 SLC30A4O14863 429 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 KAT7O95251 611 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 MAP3K8P41279 467 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 DCDC1P59894 354 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 RAB4BP61018 213 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 LIPEQ05469 1076 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 TARBP2Q15633 366 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 EGFLAMQ63HQ2 1017 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ZNF554Q86TJ5 538 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 TRMT10AQ8TBZ6 339 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 STK32AQ8WU08 396 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 GAD1Q99259 594 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ATP10BO94823 1461 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 TMEM94Q12767 1356 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 BANF1O75531 89 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ITGA5P08648 1049 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 RPS2P15880 293 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 GRK6P43250 576 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 PER3P56645 1201 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ZNF844Q08AG5 666 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 SMARCB1Q12824 385 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 CTBP1Q13363 440 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 PABPC1LQ4VXU2 614 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 FAM46CQ5VWP2 391 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 MLIPQ5VWP3 458 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 C16orf58Q96GQ5 468 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 MFSD14AQ96MC6 490 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 SEMA3CQ99985 751 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 MED11Q9P086 117 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 OR12D3Q9UGF7 316 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ZNF490Q9ULM2 529 aaPredicted RBP12.27□□□□□ -0.45
SMU1-201ENST00000397149 KCNS2Q9ULS6 477 aa12.27□□□□□ -0.45
SMU1-201ENST00000397149 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 CAPN14A8MX76 684 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 ARPC2O15144 300 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 TLL1O43897 1013 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 RPL22P35268 128 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 XKR4Q5GH76 650 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 AHSA2Q719I0 299 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 SLC9A9Q8IVB4 645 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 SPAG16Q8N0X2 631 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 GAS2L1Q99501 681 aaPredicted RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 GORASP1Q9BQQ3 440 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 PADI2Q9Y2J8 665 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 A0A1W2PQ67 120 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 FPGTO14772 594 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 COL6A1P12109 1028 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 EPHA3P29320 983 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 TTPAP49638 278 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 FOLH1Q04609 750 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 ST3GAL4Q11206 333 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 DLG2Q15700 870 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 ATAD3CQ5T2N8 411 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 IQCHQ86VS3 1027 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 HJURPQ8NCD3 748 aaPredicted RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 RCN3Q96D15 328 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 HMX1Q9NP08 348 aaPredicted RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 COMMD3Q9UBI1 195 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 MTRRQ9UBK8 725 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 TRPV2Q9Y5S1 764 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 COMMD3-BMI1R4GMX3 469 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 E5RJQ4 531 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 M0R129 80 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 RPP14O95059 124 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 PAPSS2O95340 614 aaPredicted RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 OTCP00480 354 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 CFIP05156 583 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 MC4RP32245 332 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 CDH13P55290 713 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 ARPC4P59998 168 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 USP4Q13107 963 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 PCBP2Q15366 365 aaKnown RBP eCLIP12.26□□□□□ -0.45
SMU1-201ENST00000397149 ZNF709Q8N972 641 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 NPLOC4Q8TAT6 608 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 FAM151AQ8WW52 585 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 RBM18Q96H35 190 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 SLC38A3Q99624 504 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 BLOC1S4Q9NUP1 217 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 FXYD6-FXYD2A0A087WZ82 144 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 NT5C1B-RDH14C9J2C7 533 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 KHNYNO15037 678 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 ARCN1P48444 511 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 NR2C2P49116 596 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 AIMP2Q13155 320 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 PLEKHG6Q3KR16 790 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 OGFOD2Q6N063 350 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 ASB18Q6ZVZ8 466 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 KCTD9Q7L273 389 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 MRPL45Q9BRJ2 306 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 WDR12Q9GZL7 423 aaKnown RBP12.26□□□□□ -0.45
SMU1-201ENST00000397149 FXYD6Q9H0Q3 95 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 ABCC13Q9NSE7 274 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 NINJ2Q9NZG7 142 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 NYAP2Q9P242 653 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 TLE2Q04725 743 aa12.26□□□□□ -0.45
SMU1-201ENST00000397149 FBXO48Q5FWF7 155 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms