RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 RGS18Q9NS28 235 aa9.77□□□□□ -0.84
TRIM39-203ENST00000396547 INTS10Q9NVR2 710 aaKnown RBP9.77□□□□□ -0.84
TRIM39-203ENST00000396547 MPP6Q9NZW5 540 aa9.77□□□□□ -0.84
TRIM39-203ENST00000396547 MARCH4Q9P2E8 410 aaPredicted RBP9.77□□□□□ -0.84
TRIM39-203ENST00000396547 FAM50BQ9Y247 325 aa9.77□□□□□ -0.84
TRIM39-203ENST00000396547 C16orf96A6NNT2 1141 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ENPP3O14638 875 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 HSD17B1P14061 328 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 NPR3P17342 541 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 CRHBPP24387 322 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SERPINB1P30740 379 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 CA8P35219 290 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 PIGAP37287 484 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 DGKQP52824 942 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 CACNB2Q08289 660 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 PRMT9Q6P2P2 845 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 PLPPR4Q7Z2D5 763 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ISCA2Q86U28 154 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SLC22A9Q8IVM8 553 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 MINDY1Q8N5J2 469 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 FAM86B1Q8N7N1 296 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ZNF555Q8NEP9 628 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 OSCP1Q8WVF1 389 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SNX27Q96L92 541 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 KLHL5Q96PQ7 755 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 DUSP16Q9BY84 665 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ALOXE3Q9BYJ1 711 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ATP13A3Q9H7F0 1226 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 WDR6Q9NNW5 1121 aaKnown RBP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 HPS4Q9NQG7 708 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 NDFIP2Q9NV92 336 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 FBXW11Q9UKB1 542 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 NCAM2O15394 837 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 MTSS1O43312 755 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SNX2O60749 519 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 JRKO75564 520 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 C1RP00736 705 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ITGB6P18564 788 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 FMO3P31513 532 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 ARSDP51689 593 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 WNT3AP56704 352 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 NCS1P62166 190 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SP3Q02447 781 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 CHRNB3Q05901 458 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 GRSF1Q12849 480 aaKnown RBP eCLIP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 DAG1Q14118 895 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SIM2Q14190 667 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SELPLGQ14242 412 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 THOC7Q6I9Y2 204 aaKnown RBP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 DENND5AQ6IQ26 1287 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 C8orf82Q6P1X6 216 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 DCP1BQ8IZD4 617 aaKnown RBP9.77□□□□□ -0.85
TRIM39-203ENST00000396547 FRS2Q8WU20 508 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 AFG1LQ8WV93 481 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 TNIP3Q96KP6 325 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 SPATC1LQ9H0A9 340 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 NT5MQ9NPB1 228 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 PCDHA9Q9Y5H5 950 aa9.77□□□□□ -0.85
TRIM39-203ENST00000396547 G3V2T6 193 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 NDUFS2O75306 463 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 DEAF1O75398 565 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 ANXA9O76027 345 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 HLA-DQB2P05538 268 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 PRSS56P0CW18 603 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 CD47Q08722 323 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 ACAP2Q15057 778 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 RBBP7Q16576 425 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 PHKG1Q16816 387 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 C6orf141Q5SZD1 244 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 CLEC20AQ6ZU45 233 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 ARMCX2Q7L311 632 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 NSMCE3Q96MG7 304 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 CDK15Q96Q40 435 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 NODALQ96S42 347 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 C17orf80Q9BSJ5 609 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 FEM1AQ9BSK4 669 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 THUMPD3Q9BV44 507 aaKnown RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 MROQ9BYG7 248 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 OAS3Q9Y6K5 1087 aaKnown RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 BBIP1A8MTZ0 92 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 CNMDO75829 334 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 SEC24AO95486 1093 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 CST1P01037 141 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 FTH1P02794 183 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 BMP4P12644 408 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 HRH2P25021 359 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 RPS3AP61247 264 aaKnown RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 SOX4Q06945 474 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 SELENBP1Q13228 472 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 KCNAB2Q13303 367 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 TAF1CQ15572 869 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 CTU2Q2VPK5 515 aaKnown RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 AASDHQ4L235 1098 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-203ENST00000396547 BLOC1S3Q6QNY0 202 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 HACD2Q6Y1H2 254 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 FRA10AC1Q70Z53 315 aa9.76□□□□□ -0.85
TRIM39-203ENST00000396547 TFAP2DQ7Z6R9 452 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms