RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SH3BP5O60239 455 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 NUAK1O60285 661 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 DNAJC6O75061 913 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 ZNF8P17098 575 aaPredicted RBP18.99■□□□□ 0.63
HOXA9-202ENST00000396345 GRK6P43250 576 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 PRAMEP78395 509 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 TMEM115Q12893 351 aaPredicted RBP18.99■□□□□ 0.63
HOXA9-202ENST00000396345 GTF2H3Q13889 308 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 KHDC1Q4VXA5 237 aaKnown RBP18.99■□□□□ 0.63
HOXA9-202ENST00000396345 AFTPHQ6ULP2 937 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 CES3Q6UWW8 571 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 MICALCLQ6ZW33 695 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 GALNT13Q8IUC8 556 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 PDIK1LQ8N165 341 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 NXPE1Q8N323 547 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 NOA1Q8NC60 698 aaKnown RBP18.99■□□□□ 0.63
HOXA9-202ENST00000396345 OR6P1Q8NGX9 317 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 RHBDD1Q8TEB9 315 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 MFSD3Q96ES6 412 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 TTC25Q96NG3 672 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 CARD6Q9BX69 1037 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 ZCCHC2Q9C0B9 1178 aaKnown RBP18.99■□□□□ 0.63
HOXA9-202ENST00000396345 CLPBQ9H078 707 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 TMEM168Q9H0V1 697 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 BTBD3Q9Y2F9 522 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 DMXL1Q9Y485 3027 aa18.99■□□□□ 0.63
HOXA9-202ENST00000396345 TRBV5-4A0A0C4DH59 114 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 FAM237BA0A1B0GVD1 139 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 GPR89AB7ZAQ6 455 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 TM4SF5O14894 197 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 TP73O15350 636 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 FFAR2O15552 330 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 CDK14O94921 469 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 GOT2P00505 430 aaKnown RBP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 CELA2BP08218 269 aaPredicted RBP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 GPR89BP0CG08 455 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 PRSS56P0CW18 603 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 MSH3P20585 1137 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 AKT1P31749 480 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 FOXN2P32314 431 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 CDKN1CP49918 316 aaPredicted RBP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 ARL4CP56559 192 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 SLC7A5Q01650 507 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 DHX9Q08211 1270 aaKnown RBP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 BBS9Q3SYG4 887 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 PYCR3Q53H96 274 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 PIP4P1Q86T03 277 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 SERPINA9Q86WD7 417 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 GKN2Q86XP6 184 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 AGGF1Q8N302 714 aaeCLIP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 EID2Q8N6I1 236 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 OR4L1Q8NH43 312 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 OR2M4Q96R27 311 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 RTKNQ9BST9 563 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 TRNAU1APQ9NX07 287 aaKnown RBP18.98■□□□□ 0.63
HOXA9-202ENST00000396345 PRKAB1Q9Y478 270 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 MAD1L1Q9Y6D9 718 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 BPTFQ12830 3046 aa18.98■□□□□ 0.63
HOXA9-202ENST00000396345 LMO7DNF2Z398 122 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 GRID2O43424 1007 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 ANXA6P08133 673 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 ALPPL2P10696 532 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 PAMP19021 973 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 ID4P47928 161 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 HIF1AQ16665 826 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 MSS51Q4VC12 460 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 PSAPL1Q6NUJ1 521 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 TAF8Q7Z7C8 310 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 PIANPQ8IYJ0 282 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 SDR16C5Q8N3Y7 309 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 HEXDCQ8WVB3 486 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 STAMBPL1Q96FJ0 436 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 DCUN1D1Q96GG9 259 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 SGSM3Q96HU1 749 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 PWWP2AQ96N64 755 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 CAMK1GQ96NX5 476 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 COPS8Q99627 209 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 ZDHHC3Q9NYG2 299 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 NLGN3Q9NZ94 848 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 GRHL1Q9NZI5 618 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 DOLKQ9UPQ8 538 aa18.97■□□□□ 0.63
HOXA9-202ENST00000396345 PCYT1BQ9Y5K3 369 aaPredicted RBP18.97■□□□□ 0.63
HOXA9-202ENST00000396345 CHUKO15111 745 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 YY2O15391 372 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 BANF1O75531 89 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 GIMD1P0DJR0 217 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 RALBP11234 206 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 ACRV1P26436 265 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 DRG2P55039 364 aaKnown RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 ILF3Q12906 894 aaKnown RBP eCLIP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 DEFB133Q30KQ1 61 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 ANKRD20A4Q4UJ75 823 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 GLE1Q53GS7 698 aaKnown RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 FASTKD1Q53R41 847 aaKnown RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 CHST15Q7LFX5 561 aaPredicted RBP18.96■□□□□ 0.63
HOXA9-202ENST00000396345 TMEM135Q86UB9 458 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 LRRTM4Q86VH4 590 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 RASGEF1AQ8N9B8 481 aa18.96■□□□□ 0.63
HOXA9-202ENST00000396345 OR4C6Q8NH72 309 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms