RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 PARP14Q460N5 1801 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 DENRO43583 198 aaKnown RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 SEC24AO95486 1093 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 KRT8P05787 483 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 PGFP49763 221 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 NAB1Q13506 487 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 TMEM236Q5W0B7 351 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 LRRTM3Q86VH5 581 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 SLC15A4Q8N697 577 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 SGCDQ92629 289 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 CENPNQ96H22 339 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 TSSK3Q96PN8 268 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 GPR21Q99679 349 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 CNGB3Q9NQW8 809 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 MARCH4Q9P2E8 410 aaPredicted RBP13.14□□□□□ -0.31
NFKB1-202ENST00000394820 INVSQ9Y283 1065 aa13.14□□□□□ -0.31
NFKB1-202ENST00000394820 MGAMO43451 1857 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 MBLAC1A4D2B0 266 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-202ENST00000394820 NME4O00746 187 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 NBNO60934 754 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 GJB3O75712 270 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 CD247P20963 164 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ARSDP51689 593 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 HNRNPDQ14103 355 aaKnown RBP13.13□□□□□ -0.31
NFKB1-202ENST00000394820 UAP1L1Q3KQV9 507 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 PAQR3Q6TCH7 311 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 HORMAD1Q86X24 394 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 GATAD2AQ86YP4 633 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ATAD1Q8NBU5 361 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 C7orf57Q8NEG2 295 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 SNX19Q92543 992 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ADGRE2Q9UHX3 823 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 CDC7O00311 574 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 FAM20BO75063 409 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 SLC22A3O75751 556 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 CHRNA1P02708 482 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 CTPS1P17812 591 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 HK2P52789 917 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 DPYSQ14117 519 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 CPSF7Q8N684 471 aaKnown RBP13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF540Q8NDQ6 660 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 LRRC58Q96CX6 371 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 TM6SF2Q9BZW4 377 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 MUC3BQ9H195 1237 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ENTPD7Q9NQZ7 604 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 PCDHGC4Q9Y5F7 938 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ACTL7AQ9Y615 435 aa13.13□□□□□ -0.31
NFKB1-202ENST00000394820 ARVCFO00192 962 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 DCLK1O15075 740 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 TBX1O43435 398 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 ALOX15P16050 662 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 FLT3LGP49771 235 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 TRIP4Q15650 581 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 ZBED5Q49AG3 693 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 SPOUT1Q5T280 376 aaKnown RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 CROCCP3Q8IVE0 287 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 SLC15A3Q8IY34 581 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 OR4K2Q8NGD2 314 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 SEPT8Q92599 483 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 OTULINQ96BN8 352 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 RIC8BQ9NVN3 520 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 A0A1W2PQH9 124 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 A8MV72 311 aaPredicted RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 FBP2O00757 339 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 GSRP00390 522 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 ASGR1P07306 291 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 AZGP1P25311 298 aaKnown RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 PRDX6P30041 224 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 GDF5P43026 501 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 BMXP51813 675 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 CD300CQ08708 224 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 INAQ16352 499 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 ZNF598Q86UK7 904 aaKnown RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 OR10T2Q8NGX3 314 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 OSCP1Q8WVF1 389 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 DPY30Q9C005 99 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 TRIM39Q9HCM9 518 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 hCG_2039718K7EN88 272 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 PFDN6O15212 129 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
NFKB1-202ENST00000394820 MGEA5O60502 916 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 RAMP2O60895 175 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 CBFA2T3O75081 653 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 CAPN3P20807 821 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 RENBPP51606 427 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 VBP1P61758 197 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 SLC13A2Q13183 592 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 MFSD14CQ5VZR4 134 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 LINGO4Q6UY18 593 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 TMEM135Q86UB9 458 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 PHACTR4Q8IZ21 702 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 SCN3BQ9NY72 215 aa13.12□□□□□ -0.31
NFKB1-202ENST00000394820 TAS2R13Q9NYV9 303 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms