RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 RNF145Q96MT1 663 aa13.83□□□□□ -0.19
GAPVD1-205ENST00000394084 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.19
GAPVD1-205ENST00000394084 TRIM54Q9BYV2 358 aa13.83□□□□□ -0.19
GAPVD1-205ENST00000394084 RPF2Q9H7B2 306 aaKnown RBP13.83□□□□□ -0.19
GAPVD1-205ENST00000394084 BPIFA1Q9NP55 256 aa13.83□□□□□ -0.19
GAPVD1-205ENST00000394084 TCRBV5S2A0A599 114 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 GIPC1O14908 333 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 GPIP06744 558 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 IL12AP29459 219 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 RFC2P35250 354 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 ZFP36L2P47974 494 aaKnown RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 KCNQ1P51787 676 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 POLR2JP52435 117 aaKnown RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 RCAN2Q14206 197 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 TRIP4Q15650 581 aaPredicted RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 NEDD8Q15843 81 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 PARP15Q460N3 678 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 TBPL2Q6SJ96 375 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 GLT6D1Q7Z4J2 308 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 SPRED1Q7Z699 444 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 LGI2Q8N0V4 545 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 FNDC5Q8NAU1 212 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 FATE1Q969F0 183 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 UROC1Q96N76 676 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 NPLQ9BXD5 320 aaPredicted RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 DERL2Q9GZP9 239 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 CCSER2Q9H7U1 834 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 POLR1BQ9H9Y6 1135 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 CXorf21Q9HAI6 301 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 NDST3O95803 873 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 RPS17P08708 135 aaKnown RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 RPS9P46781 194 aaKnown RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 OR4D2P58180 307 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 NANOGP8Q6NSW7 305 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 GPR180Q86V85 440 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 C2orf69Q8N8R5 385 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 BIRC7Q96CA5 298 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 ZNF599Q96NL3 588 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 NANOGQ9H9S0 305 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 POPDC3Q9HBV1 291 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 ZFYVE28Q9HCC9 887 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 SMPD3Q9NY59 655 aaPredicted RBP13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 SUN2Q9UH99 717 aa13.83□□□□□ -0.2
GAPVD1-205ENST00000394084 LCHNA4D1U4 455 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 GLTPD2A6NH11 291 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 SYNCRIPO60506 623 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 ATE1O95260 518 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 CHEK2O96017 543 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 HOXB8P17481 243 aaPredicted RBP13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 IRF5Q13568 498 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 C16orf72Q14CZ0 275 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 TYSND1Q2T9J0 566 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 TMEM214Q6NUQ4 689 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 SPATA19Q7Z5L4 167 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 EFHBQ8N7U6 833 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 MDGA1Q8NFP4 955 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 NAA50Q9GZZ1 169 aaKnown RBP13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 CD274Q9NZQ7 290 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 PCTPQ9UKL6 214 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 PCDHB5Q9Y5E4 795 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 DRGXA6NNA5 263 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 GPR39O43194 453 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 TSPAN3O60637 253 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 LDLRP01130 860 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 PCNAP12004 261 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 CAPGP40121 348 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 HK3P52790 923 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 FOXM1Q08050 763 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 PSAPL1Q6NUJ1 521 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 ABRAXAS1Q6UWZ7 409 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 TMEM26Q6ZUK4 368 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 PIANPQ8IYJ0 282 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 OR52B6Q8NGF0 335 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 EEF1AKMT1Q8WVE0 214 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 C8orf48Q96LL4 319 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 PPM1MQ96MI6 270 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 LMCD1Q9NZU5 365 aa13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 LEF1Q9UJU2 399 aaPredicted RBP13.82□□□□□ -0.2
GAPVD1-205ENST00000394084 VPS4BO75351 444 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 ESRRBO95718 433 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 TACR2P21452 398 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 HRH2P25021 359 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 ZNF140P52738 457 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 NFE2Q16621 373 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 C18orf21Q32NC0 220 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 CTXN3Q4LDR2 81 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 CYBRD1Q53TN4 286 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 VARS2Q5ST30 1063 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 TMEM199Q8N511 208 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 LPCAT1Q8NF37 534 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 LINGO1Q96FE5 620 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 CHID1Q9BWS9 393 aa13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 INTS10Q9NVR2 710 aaKnown RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 NLE1Q9NVX2 485 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 EVLQ9UI08 416 aaPredicted RBP13.81□□□□□ -0.2
GAPVD1-205ENST00000394084 FKBPLQ9UIM3 349 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms