RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SMCO2A6NFE2 343 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SHISA8B8ZZ34 492 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 UQCRFS1P1P0C7P4 283 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CCDC130P13994 396 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 AKT2P31751 481 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PRCPP42785 496 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NAPAP54920 295 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NCKAP1LP55160 1127 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SNRPEP62304 92 aaKnown RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 TMEM182Q6ZP80 229 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 TBC1D26Q86UD7 250 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CCDC25Q86WR0 208 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 GAS2L3Q86XJ1 694 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PALB2Q86YC2 1186 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ANKRD13CQ8N6S4 541 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RASGEF1AQ8N9B8 481 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ASZ1Q8WWH4 475 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 DHTKD1Q96HY7 919 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 PWWP2AQ96N64 755 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 EGFL8Q99944 293 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HSD3B7Q9H2F3 369 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 DNAJC11Q9NVH1 559 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RLIMQ9NVW2 624 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 LMCD1Q9NZU5 365 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RNF181Q9P0P0 153 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 KIAA1456Q9P272 454 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 DKK4Q9UBT3 224 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 VAV3Q9UKW4 847 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PLCL2Q9UPR0 1127 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MGAT4BQ9UQ53 548 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ERVK-11Q9UQG0 969 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NEU2Q9Y3R4 380 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 DMDP11532 3685 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 FAM205AQ6ZU69 1335 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 LOC100506127A0A0U1RQW1 187 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HMX2A2RU54 273 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RAB19A4D1S5 217 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MBD3L5A6NJ08 208 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 KBTBD13C9JR72 458 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 LDLRAD4O15165 306 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SLC43A1O75387 559 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CDKL5O76039 1030 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TOMM70O94826 608 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CHRNGP07510 517 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 F7P08709 466 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 TNNC1P63316 161 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TAP2Q03519 686 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ABHD18Q0P651 414 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TUBB3Q13509 450 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PCOLCEQ15113 449 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SGCBQ16585 318 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 Q3ZCU0 254 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ARMC12Q5T9G4 340 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 WBP2NLQ6ICG8 309 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ZNF410Q86VK4 478 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CARFQ8N187 725 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ACTRT2Q8TDY3 377 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RAB40AQ8WXH6 277 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RAD9AQ99638 391 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SYT3Q9BQG1 590 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NUDT22Q9BRQ3 303 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 LHPPQ9H008 270 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 P2RY12Q9H244 342 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 MTIF3Q9H2K0 278 aaKnown RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 PAK6Q9NQU5 681 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 SPATS2LQ9NUQ6 558 aaKnown RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 STOML1Q9UBI4 398 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HSPB7Q9UBY9 170 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CDH7Q9ULB5 785 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 DNAH14Q0VDD8 3507 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 FAM237AA0A1B0GTK4 181 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SERTM2A0A1B0GWG4 89 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 LGALS8O00214 317 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RNF13O43567 381 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PLRG1O43660 514 aaKnown RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 SMC2O95347 1197 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HIST1H2ABP04908 130 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HIST1H2ADP20671 130 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CD9P21926 228 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HOXA13P31271 388 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 SLC6A11P48066 632 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 AP3M2P53677 418 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 UCP2P55851 309 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HSPA14Q0VDF9 509 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RFTN1Q14699 578 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 FUT11Q495W5 492 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 PHYHD1Q5SRE7 291 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 HIST3H2AQ7L7L0 130 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 SPATA2LQ8IUW3 424 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 IZUMO1Q8IYV9 350 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 ELMOD2Q8IZ81 293 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 FMR1NBQ8N0W7 255 aaPredicted RBP3.53□□□□□ -1.84
XRN1-202ENST00000392981 MMP21Q8N119 569 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TMEM130Q8N3G9 435 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 TMEM185AQ8NFB2 350 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 RDM1Q8NG50 284 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 NEK9Q8TD19 979 aa3.53□□□□□ -1.84
XRN1-202ENST00000392981 CASKIN2Q8WXE0 1202 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms