RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 QPRTQ15274 297 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 HFE2Q6ZVN8 426 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 TOP1MTQ969P6 601 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 KLRG1Q96E93 195 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 NSMCE3Q96MG7 304 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PCYT2Q99447 389 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 GDAP2Q9NXN4 497 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PCP4L1A6NKN8 68 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 XYLBO75191 536 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 AQP1P29972 269 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 RBM20Q5T481 1227 aaKnown RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 DCDC5Q6ZRR9 648 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 A8MV72 311 aaPredicted RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 H3BMQ9 156 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 SEMA3DO95025 777 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 IFI30P13284 250 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 SCNN1GP51170 649 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 PITX1P78337 314 aaPredicted RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 CLCQ05315 142 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 AP5B1Q2VPB7 878 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 ZNF280DQ6N043 979 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 TXNDC5Q8NBS9 432 aaKnown RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 STYXQ8WUJ0 223 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 CENPIQ92674 756 aaPredicted RBP14.16□□□□□ -0.14
RTF1-201ENST00000389629 COG8Q96MW5 612 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 KCNS3Q9BQ31 491 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 SMURF2Q9HAU4 748 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 DERAQ9Y315 318 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 NUMBLQ9Y6R0 609 aa14.16□□□□□ -0.14
RTF1-201ENST00000389629 C22orf31O95567 290 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 NPTX1Q15818 432 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 GRIN3AQ8TCU5 1115 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 TMEM174Q8WUU8 243 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 SDHDO14521 159 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 NRP1O14786 923 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 CYBBP04839 570 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 MZF1P28698 734 aaPredicted RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 AXLP30530 894 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 SRP54P61011 504 aaKnown RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 INCA1Q0VD86 236 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 TSNQ15631 228 aaKnown RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 TYSND1Q2T9J0 566 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 PPP4R4Q6NUP7 873 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 NEK10Q6ZWH5 1172 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 DET1Q7L5Y6 550 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 TP53INP2Q8IXH6 220 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 TMEM86AQ8N2M4 240 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 OR10Q1Q8NGQ4 319 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 ZFP42Q96MM3 310 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 MAGEE1Q9HCI5 957 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 ADPRHL2Q9NX46 363 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 ACTR3BQ9P1U1 418 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 OPTCQ9UBM4 332 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 FBXW11Q9UKB1 542 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 LAMB1P07942 1786 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 CCDC162PA2VCL2 907 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 MGAT4DA6NG13 374 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 GSTM1P09488 218 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 PAX3P23760 479 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 OR2B6P58173 313 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 NOMO2Q5JPE7 1267 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 GNASQ5JWF2 1037 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 STEAP4Q687X5 459 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 YME1L1Q96TA2 773 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 BPIFA1Q9NP55 256 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 TLL2Q9Y6L7 1015 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 MYH14Q7Z406 1995 aaKnown RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 ULK1O75385 1050 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 TSPAN19P0C672 248 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 CHI3L1P36222 383 aaPredicted RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 SLC13A2Q13183 592 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 IL18R1Q13478 541 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 CLIP4Q8N3C7 705 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 NKAPQ8N5F7 415 aaKnown RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 TOP6BLQ8N6T0 577 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 RTP4Q96DX8 246 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 HNRNPABQ99729 332 aaKnown RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 CLEC4MQ9H2X3 399 aaPredicted RBP14.15□□□□□ -0.14
RTF1-201ENST00000389629 ABCB9Q9NP78 766 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 PRELID1Q9Y255 219 aa14.15□□□□□ -0.14
RTF1-201ENST00000389629 ELOVL7A1L3X0 281 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ADM5C9JUS6 153 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 MYL12BO14950 172 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 SLC22A1O15245 554 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ABCB7O75027 752 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 ATE1O95260 518 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 MAPK1P28482 360 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 TARBP2Q15633 366 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 CPSF6Q16630 551 aaKnown RBP eCLIP14.14□□□□□ -0.152e-10■■■■■ 38.7
RTF1-201ENST00000389629 ZNF284Q2VY69 593 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 INTS6LQ5JSJ4 861 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 KIAA0408Q6ZU52 694 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 OR4L1Q8NH43 312 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 TRUB1Q8WWH5 349 aaKnown RBP14.14□□□□□ -0.15
RTF1-201ENST00000389629 LPPQ93052 612 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 EXOC2Q96KP1 924 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 YIPF2Q9BWQ6 316 aa14.14□□□□□ -0.15
RTF1-201ENST00000389629 H2AFY2Q9P0M6 372 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms