RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TADA2BQ86TJ2 420 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 KCNMB4Q86W47 210 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 LONP2Q86WA8 852 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 TICAM1Q8IUC6 712 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 FMNL3Q8IVF7 1028 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DHX40Q8IX18 779 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 BEST3Q8N1M1 668 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 GBGT1Q8N5D6 347 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 TMEM178AQ8NBL3 297 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 STAMQ92783 540 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 RFT1Q96AA3 541 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SH3KBP1Q96B97 665 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 RHBDF1Q96CC6 855 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 GIMAP5Q96F15 307 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SGCZQ96LD1 299 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 ZSCAN31Q96LW9 406 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SMC6Q96SB8 1091 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CD180Q99467 661 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 RTP3Q9BQQ7 232 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 RPP25Q9BUL9 199 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 HEMGNQ9BXL5 484 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 CLEC7AQ9BXN2 247 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 LCE3DQ9BYE3 92 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PUS3Q9BZE2 481 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 TRIM6Q9C030 488 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 P2RY12Q9H244 342 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 MROH8Q9H579 483 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 STN1Q9H668 368 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 KAT14Q9H8E8 782 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 SEBOXQ9HB31 216 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 APOBEC3GQ9HC16 384 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 G6PC2Q9NQR9 355 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 ACSS1Q9NUB1 689 aaPredicted RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DACT1Q9NYF0 836 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 NUDT4Q9NZJ9 180 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 THEGQ9P2T0 379 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 MUTYHQ9UIF7 546 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 PADI3Q9ULW8 664 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 EXO1Q9UQ84 846 aaKnown RBP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 ERVK-11Q9UQG0 969 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP0.47□□□□□ -2.33
SNORD28-201ENST00000384706 GDAQ9Y2T3 454 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 DERAQ9Y315 318 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 RABGAP1Q9Y3P9 1069 aa0.47□□□□□ -2.33
SNORD28-201ENST00000384706 ASTN2O75129 1339 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 A0A087WV62 115 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 OR5K3A6NET4 321 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FAM90A7PA6NKC0 464 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 OR6C76A6NM76 312 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FAM90A22PA8MWA6 464 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FAM90A12PA8MX19 464 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FAM90A23PA8MXZ1 464 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KPNA7A9QM74 516 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ANKRD66B4E2M5 251 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 SLCO1B7G3V0H7 640 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ACKR2O00590 384 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 VCYO14598 125 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF197O14709 1029 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ANKRD28O15084 1053 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KCNN4O15554 427 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 IRAK2O43187 625 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 BCL2L11O43521 198 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CDC123O75794 336 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 PDE9AO76083 593 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 BMP10O95393 424 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CLDN1O95832 211 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FTCDO95954 541 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 TFP02787 698 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 HEXAP06865 529 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 GALTP07902 379 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZSCAN5DPP0CG00 497 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FAM157CP0CG43 387 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KLK2P20151 261 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 MCCP23508 829 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CST5P28325 142 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 RBMS1P29558 406 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ELF1P32519 619 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DRD3P35462 400 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 MCM2P49736 904 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 GNAQP50148 359 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 NEK3P51956 506 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CDH11P55287 796 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CDR2Q01850 454 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 BTKQ06187 659 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 MAD2L1Q13257 205 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DRP2Q13474 957 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 PICALMQ13492 652 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 TDGQ13569 410 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 DECR1Q16698 335 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 HIST2H2ACQ16777 129 aaPredicted RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 CTU2Q2VPK5 515 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 C15orf32Q32M92 178 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 MYLK3Q32MK0 819 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF766Q5HY98 468 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 ZNF667Q5HYK9 610 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 NDUFAF5Q5TEU4 345 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 KHDRBS2Q5VWX1 349 aaKnown RBP0.46□□□□□ -2.34
SNORD28-201ENST00000384706 FRG2Q64ET8 278 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 IL31Q6EBC2 164 aa0.46□□□□□ -2.34
SNORD28-201ENST00000384706 IL27RAQ6UWB1 636 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms