RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GPN2Q9H9Y4 310 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 ATAD3AQ9NVI7 634 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 INTS10Q9NVR2 710 aaKnown RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF232Q9UNY5 417 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 AURKCQ9UQB9 309 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TMEM247A6NEH6 219 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 KPNA4O00629 521 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 BCL10O95999 233 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 FUCA1P04066 466 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 HMBSP08397 361 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 RBP1P09455 135 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 ATXN8OSP0DMR3 200 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 UMPSP11172 480 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 HNRNPLP14866 589 aaKnown RBP eCLIP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 PAMP19021 973 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 CCR3P51677 355 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 GEMP55040 296 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 NR1D2Q14995 579 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TPGS2Q68CL5 300 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 KIAA0408Q6ZU52 694 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TMEM26Q6ZUK4 368 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 USP51Q70EK9 711 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 LARP4Q71RC2 724 aaKnown RBP eCLIP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 SLC39A11Q8N1S5 342 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF461Q8TAF7 563 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 GABPB2Q8TAK5 448 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 CYGBQ8WWM9 190 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF689Q96CS4 500 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TMEM169Q96HH4 297 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF419Q96HQ0 510 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 MAGED4Q96JG8 741 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 APOL2Q9BQE5 337 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 RBM22Q9NW64 420 aaKnown RBP eCLIP8.89□□□□□ -0.99
GPNMB-202ENST00000381990 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 DNMT3LQ9UJW3 386 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 OAZ3Q9UMX2 235 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 TCAF1Q9Y4C2 921 aa8.89□□□□□ -0.99
GPNMB-202ENST00000381990 CROCCQ5TZA2 2017 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 HTR3EA5X5Y0 456 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 GOLGA8TH3BQL2 631 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CLPXO76031 633 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CNTN5O94779 1100 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ABLIM3O94929 683 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 HLA-DQB2P05538 268 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ATP5C1P36542 298 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CD151P48509 253 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 BNIP3Q12983 259 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 SEPT6Q14141 434 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ALFQ53S48 1182 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CYBRD1Q53TN4 286 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 TECRLQ5HYJ1 363 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF773Q6PK81 442 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 XKR5Q6UX68 686 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CEP97Q8IW35 865 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 MINDY2Q8NBR6 621 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 SPATA22Q8NHS9 363 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 HEXDCQ8WVB3 486 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 IGSF8Q969P0 613 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 HMCESQ96FZ2 354 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 RPRD1AQ96P16 312 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 OMDQ99983 421 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 TBL1YQ9BQ87 522 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 HERC2P3Q9BVR0 1158 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 RIC8BQ9NVN3 520 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 TRAF6Q9Y4K3 522 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 MRPL42Q9Y6G3 142 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CCDC78A2IDD5 438 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 CARNS1A5YM72 827 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 NME4O00746 187 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ACOX3O15254 700 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 SEC14L2O76054 403 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 SEC24DO94855 1032 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 SEC24AO95486 1093 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 PEX11BO96011 259 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 F7P08709 466 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 MBL2P11226 248 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 RPL10P27635 214 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 RPS9P46781 194 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 TMED10P49755 219 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 RENBPP51606 427 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 PPP1R3AQ16821 1122 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 AASDHQ4L235 1098 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 OGFOD2Q6N063 350 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 DDIASQ8IXT1 998 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 TBC1D21Q8IYX1 336 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ADGRG5Q8IZF4 528 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 SFRP1Q8N474 314 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF513Q8N8E2 541 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 C2CD4AQ8NCU7 369 aaPredicted RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 PAPD5Q8NDF8 572 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 PPHLN1Q8NEY8 458 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ASB2Q96Q27 587 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 TRIM54Q9BYV2 358 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 UNKQ9C0B0 810 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 RC3H2Q9HBD1 1191 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 PSME2Q9UL46 239 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 DOLKQ9UPQ8 538 aa8.88□□□□□ -0.99
GPNMB-202ENST00000381990 FAM32AQ9Y421 112 aaKnown RBP8.88□□□□□ -0.99
GPNMB-202ENST00000381990 ZNF840PA6NDX5 716 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms