RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 E7ESA3 106 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 TBX10O75333 385 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 TRPC1P48995 793 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 SLC20A2Q08357 652 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF549Q6P9A3 640 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 FAM124AQ86V42 546 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 ANKRD46Q86W74 232 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 PLD4Q96BZ4 506 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 AARSD1Q9BTE6 412 aaKnown RBP13.1□□□□□ -0.31
NPHP4-203ENST00000378169 PCDHAC1Q9H158 963 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 KRT84Q9NSB2 600 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 PLCH1Q4KWH8 1693 aa13.1□□□□□ -0.31
NPHP4-203ENST00000378169 H3BM21 787 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SLC28A1O00337 649 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ESR1P03372 595 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 RPN2P04844 631 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 EFNA1P20827 205 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CYP4F2P78329 520 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 MARCH8Q5T0T0 291 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 LYPLAL1Q5VWZ2 237 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 KIAA1324Q6UXG2 1013 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 LYSMD3Q7Z3D4 306 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 TMPRSS11BQ86T26 416 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ZC3H7AQ8IWR0 971 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ADHFE1Q8IWW8 467 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CSGALNACT1Q8TDX6 532 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SH3RF2Q8TEC5 729 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GPR22Q99680 433 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 LRTM1Q9HBL6 345 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF623O75123 536 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ERAL1O75616 437 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 WFS1O76024 890 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CST1P01037 141 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 PTGER3P43115 390 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ANXA11P50995 505 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 POLR2JP52435 117 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 TAF1AQ15573 450 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GET4Q7L5D6 327 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SLC39A3Q9BRY0 314 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 TMLHEQ9NVH6 421 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 A0A087WXM4 84 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 A0A1W2PQ67 120 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SOCS7O14512 581 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GABRDO14764 452 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GGT5P36269 586 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SULT2A1Q06520 285 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 PLEKHG4Q58EX7 1191 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CNTD1Q8N815 330 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 TSPAN14Q8NG11 270 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GALPQ9UBC7 116 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 SCAMP1O15126 338 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GJB5O95377 273 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 EIF2S1P05198 315 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 EPHX1P07099 455 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CREB5Q02930 508 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 BNIP2Q12982 314 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 CBX2Q14781 532 aaPredicted RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 FRMD7Q6ZUT3 714 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF598Q86UK7 904 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 STX19Q8N4C7 294 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 WDR60Q8WVS4 1066 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 OR8D1Q8WZ84 308 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 IMP3Q9NV31 184 aaKnown RBP13.09□□□□□ -0.31
NPHP4-203ENST00000378169 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 TBC1D14Q9P2M4 693 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 GPSM3Q9Y4H4 160 aa13.09□□□□□ -0.31
NPHP4-203ENST00000378169 MYH4Q9Y623 1939 aa13.08□□□□□ -0.31
NPHP4-203ENST00000378169 DCLK1O15075 740 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 FAM20BO75063 409 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 SERPINI2O75830 405 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 POP4O95707 220 aaKnown RBP13.08□□□□□ -0.32
NPHP4-203ENST00000378169 GALTP07902 379 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
NPHP4-203ENST00000378169 MYH9P35579 1960 aaKnown RBP13.08□□□□□ -0.32
NPHP4-203ENST00000378169 PCLAFQ15004 111 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 GLYATQ6IB77 296 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 TTC9BQ8N6N2 239 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 OR9I1Q8NGQ6 314 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 SLC2A13Q96QE2 648 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 CXCL16Q9H2A7 254 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 GNEQ9Y223 722 aaKnown RBP13.08□□□□□ -0.32
NPHP4-203ENST00000378169 ADH1CP00326 375 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 TNK2Q07912 1038 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 SPIDRQ14159 915 aa13.08□□□□□ -0.32
NPHP4-203ENST00000378169 APLFQ8IW19 511 aaPredicted RBP13.08□□□□□ -0.32
NPHP4-203ENST00000378169 C2orf15Q8WU43 125 aaKnown RBP13.08□□□□□ -0.32
NPHP4-203ENST00000378169 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms