RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 GRIN2CQ14957 1233 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PLEKHG6Q3KR16 790 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 C4orf22Q6V702 233 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CCDC149Q6ZUS6 474 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 GALNT10Q86SR1 603 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 COL26A1Q96A83 441 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 AP2M1Q96CW1 435 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 APOLD1Q96LR9 279 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 SLC30A3Q99726 388 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 RIOK2Q9BVS4 552 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 OR2AG1Q9H205 316 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ARMC7Q9H6L4 198 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 EPS15L1Q9UBC2 864 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 B4GALT6Q9UBX8 382 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PSMD12O00232 456 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PRMT5O14744 637 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 IPO13O94829 963 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PABPC1P11940 636 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 HLA-FP30511 346 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 IL10RBQ08334 325 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 DLG1Q12959 904 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CDC16Q13042 620 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 NAE1Q13564 534 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 REM2Q8IYK8 340 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ULK2Q8IYT8 1036 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 MDGA1Q8NFP4 955 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 SELENOMQ8WWX9 145 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 AURKBQ96GD4 344 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CNDP1Q96KN2 507 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PRKD2Q9BZL6 878 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CAAP1Q9H8G2 361 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 WDR41Q9HAD4 459 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 EBF2Q9HAK2 575 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PARVBQ9HBI1 364 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 STOML1Q9UBI4 398 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PPM1HQ9ULR3 514 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 SLC12A4Q9UP95 1085 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ASF1AQ9Y294 204 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ROS1P08922 2347 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 GSC2O15499 205 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 RBP1P09455 135 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 FGF3P11487 239 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 COX4I1P13073 169 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PPM1AP35813 382 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 YAP1P46937 504 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 PTDSS1P48651 473 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 DGKGP49619 791 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 KCNK10P57789 538 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 TRIM71Q2Q1W2 868 aaKnown RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ATP6AP1LQ52LC2 224 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 USP45Q70EL2 814 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CILP2Q8IUL8 1156 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CLEC4FQ8N1N0 589 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 OR10G6Q8NH81 332 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 MAGEB10Q96LZ2 347 aaPredicted RBP8.04□□□□□ -1.12
CKAP2-203ENST00000378037 TMEM74Q96NL1 305 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 IL17FQ96PD4 163 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 ECSITQ9BQ95 431 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 MTRRQ9UBK8 725 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CA5BQ9Y2D0 317 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 GPSM3Q9Y4H4 160 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 NUMBLQ9Y6R0 609 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 COL6A3P12111 3177 aa8.04□□□□□ -1.12
CKAP2-203ENST00000378037 CFAP99D6REC4 459 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 PRAMEF11O60813 436 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 MPOP05164 745 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 ALPPL2P10696 532 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 DDX5P17844 614 aaKnown RBP8.03□□□□□ -1.12
CKAP2-203ENST00000378037 HLA-DPA1P20036 260 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 PRKCHP24723 683 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 HNF1BP35680 557 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 SLC6A11P48066 632 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 AP2B1P63010 937 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 FAM189BP81408 668 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 IRF8Q02556 426 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 BNIP1Q12981 228 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 KLF10Q13118 480 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 IRF5Q13568 498 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 PLCL1Q15111 1095 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 CCDC153Q494R4 210 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 ACSBG2Q5FVE4 666 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 GCNT7Q6ZNI0 430 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 ZNF761Q86XN6 746 aaPredicted RBP8.03□□□□□ -1.12
CKAP2-203ENST00000378037 ZNF614Q8N883 585 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 CEP70Q8NHQ1 597 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 STAG3L4Q8TBR4 150 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 BRSK1Q8TDC3 778 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 DNAJC9Q8WXX5 260 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 CLIP3Q96DZ5 547 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 VN1R3Q9BXE9 311 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 CDH19Q9H159 772 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 VCX3BQ9H321 246 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 IPPKQ9H8X2 491 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 SYTL2Q9HCH5 934 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 MOCS1Q9NZB8 636 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 KIAA1522Q9P206 1035 aaPredicted RBP8.03□□□□□ -1.12
CKAP2-203ENST00000378037 OPTCQ9UBM4 332 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 KLHL20Q9Y2M5 609 aa8.03□□□□□ -1.12
CKAP2-203ENST00000378037 USP3Q9Y6I4 520 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms