RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 C9orf16Q9BUW7 83 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 CATSPERZQ9NTU4 200 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF451Q9Y4E5 1061 aa11.71□□□□□ -0.54
MCF2L-202ENST00000375597 CAPN1P07384 714 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 MAP2K4P45985 399 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 HSPA7P48741 367 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CDK18Q07002 472 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 C6orf183Q5T699 404 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CYHR1Q6ZMK1 362 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ARL10Q8N8L6 244 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 FRS2Q8WU20 508 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 EEF1AKMT1Q8WVE0 214 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TFAP2CQ92754 450 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 HPS1Q92902 700 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ABCB10Q9NRK6 738 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 FARSBQ9NSD9 589 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 FKBPLQ9UIM3 349 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TARM1B6A8C7 271 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CFAP99D6REC4 459 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 IRAK2O43187 625 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 DFNA5O60443 496 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 NPHS1O60500 1241 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CST1P01037 141 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 G6PDP11413 515 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CCNA2P20248 432 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 IMPDH1P20839 514 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 LHX1P48742 406 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SH3BGRP55822 239 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CHRNB3Q05901 458 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 MRNIPQ6NTE8 343 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF549Q6P9A3 640 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 GPR180Q86V85 440 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 RASAL3Q86YV0 1011 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 KRTCAP2Q8N6L1 136 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CALML6Q8TD86 181 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 FBXO32Q969P5 355 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TSSK3Q96PN8 268 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 GPATCH1Q9BRR8 931 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 PRDM5Q9NQX1 630 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SNX5Q9Y5X3 404 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TNS1Q9HBL0 1735 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 hCG_2039718K7EN88 272 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SLC22A3O75751 556 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 FADS2O95864 444 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 S1PR4O95977 384 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CYBBP04839 570 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 HSMCR30P0CW71 290 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 RPL17P18621 184 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 GPX3P22352 226 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 MAGEA12P43365 314 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 RENBPP51606 427 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 HERVK_113P63132 956 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SF1Q15637 639 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CYP27C1Q4G0S4 372 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 NANOGP8Q6NSW7 305 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CYS1Q717R9 158 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SYVN1Q86TM6 617 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 PYCR2Q96C36 320 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ULK4Q96C45 1275 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 CENPNQ96H22 339 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 FCRL5Q96RD9 977 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 NPLQ9BXD5 320 aaPredicted RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ERVK-6Q9BXR3 956 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ABHD16BQ9H3Z7 469 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 NANOGQ9H9S0 305 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SPC25Q9HBM1 224 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 ZFC3H1O60293 1989 aaKnown RBP11.7□□□□□ -0.54
MCF2L-202ENST00000375597 SSC5DA1L4H1 1573 aa11.7□□□□□ -0.54
MCF2L-202ENST00000375597 M0R3G1 203 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TRIM24O15164 1050 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 INMTO95050 263 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FKBP9O95302 570 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 NTRK1P04629 796 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 CHRM5P08912 532 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ODC1P11926 461 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 CLCN5P51795 746 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 NEK2P51955 445 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 POLR2JP52435 117 aaKnown RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 VBP1P61758 197 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ZXDBP98169 803 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 PFKPQ01813 784 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 LARP4Q71RC2 724 aaKnown RBP eCLIP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 FKBP9P1Q75LS8 142 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 DET1Q7L5Y6 550 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 LYSMD3Q7Z3D4 306 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TICAM1Q8IUC6 712 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 RNF175Q8N4F7 328 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 TOP6BLQ8N6T0 577 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 ZNF513Q8N8E2 541 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-202ENST00000375597 OR4L1Q8NH43 312 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 PSMA8Q8TAA3 256 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 VAT1Q99536 393 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 PRDM16Q9HAZ2 1276 aa11.69□□□□□ -0.54
MCF2L-202ENST00000375597 VTA1Q9NP79 307 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms