RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 H0Y626 953 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 H3BNC9 293 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 BTN3A1O00481 513 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 FBP2O00757 339 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 HNRNPRO43390 633 aaKnown RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 COCHO43405 550 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 KLK8O60259 260 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 ECI2O75521 394 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 STC2O76061 302 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 ESRRBO95718 433 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 NPPAP01160 153 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 FAM58BPP0C7Q3 252 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 CTSAP10619 480 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 TCN1P20061 433 aaPredicted RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 CTNNB1P35222 781 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PEX19P40855 299 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 DPP6P42658 865 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 RGS4P49798 205 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 CDH13P55290 713 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PLD1Q13393 1074 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 DYNC1I2Q13409 638 aaKnown RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 SEMA3AQ14563 771 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 IHHQ14623 411 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 CYTH1Q15438 398 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 RBBP7Q16576 425 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PPP1R3AQ16821 1122 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 RNF220Q5VTB9 566 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 C8orf82Q6P1X6 216 aaPredicted RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 PAOXQ6QHF9 649 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PAQR3Q6TCH7 311 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 ADAMTSL2Q86TH1 951 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PACRGLQ8N7B6 248 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 OR2T34Q8NGX1 318 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 OR2T3Q8NH03 318 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 GPR21Q99679 349 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PKP2Q99959 881 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 HAUS8Q9BT25 410 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 PAPOLBQ9NRJ5 636 aaKnown RBP12.13□□□□□ -0.47
UBR4-203ENST00000375225 CD274Q9NZQ7 290 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 CD300AQ9UGN4 299 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PACSIN3Q9UKS6 424 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 LZTS1Q9Y250 596 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 AP4B1Q9Y6B7 739 aa12.13□□□□□ -0.47
UBR4-203ENST00000375225 PRRG1O14668 218 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 DNAJA2O60884 412 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 TMCC1O94876 653 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 PIRTP0C851 137 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 PABPC4LP0CB38 370 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 MTHFD2P13995 350 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 HSD17B1P14061 328 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 HGFP14210 728 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 PCSK2P16519 638 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 ZNF7P17097 686 aaPredicted RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 PSMC3P17980 439 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 CHRM3P20309 590 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 PSMA4P25789 261 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 SLC7A2P52569 658 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 RHOAP61586 193 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 RPS24P62847 133 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 ROR2Q01974 943 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 CRY1Q16526 586 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 PDCD4Q53EL6 469 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 NCEH1Q6PIU2 408 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 UGT2A3Q6UWM9 527 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 GPRIN3Q6ZVF9 776 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 ITIH5Q86UX2 942 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 TICAM1Q8IUC6 712 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 RNF148Q8N7C7 305 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 EFHBQ8N7U6 833 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 PPWD1Q96BP3 646 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 PDLIM5Q96HC4 596 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 PRICKLE1Q96MT3 831 aaPredicted RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 UHRF1Q96T88 793 aaPredicted RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 KLF16Q9BXK1 252 aaPredicted RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 GPR63Q9BZJ6 419 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 MAGEE1Q9HCI5 957 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 ARMC1Q9NVT9 282 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 ABCD2Q9UBJ2 740 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 LEF1Q9UJU2 399 aaPredicted RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 STOML2Q9UJZ1 356 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 LSM7Q9UK45 103 aaKnown RBP12.12□□□□□ -0.47
UBR4-203ENST00000375225 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 YIPF1Q9Y548 306 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 SPO11Q9Y5K1 396 aa12.12□□□□□ -0.47
UBR4-203ENST00000375225 NPEPPSL1A6NEC2 478 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 RAD51BO15315 384 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 C1RP00736 705 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 CYBBP04839 570 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 ADH1AP07327 375 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 BMPR1AP36894 532 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
UBR4-203ENST00000375225 KCNC1P48547 511 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 EPHB3P54753 998 aa12.11□□□□□ -0.47
UBR4-203ENST00000375225 TIAL1Q01085 375 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms