RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 SLC25A23Q9BV35 468 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 ZNF334Q9HCZ1 680 aaPredicted RBP16.81■□□□□ 0.28
PHF1-202ENST00000374516 TNFRSF12AQ9NP84 129 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 SMOXQ9NWM0 555 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 PCDHGA4Q9Y5G9 962 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 INSL5Q9Y5Q6 135 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 ARL5AQ9Y689 179 aa16.81■□□□□ 0.28
PHF1-202ENST00000374516 CLDN11O75508 207 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 STAMBPO95630 424 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 TIMP1P01033 207 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 RHOCP08134 193 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 MYF6P23409 242 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 NME5P56597 212 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 TAS2R39P59534 338 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 NAA20P61599 178 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 SMAD3P84022 425 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 ZXDBP98169 803 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 RBM20Q5T481 1227 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 LYSMD3Q7Z3D4 306 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 DDX53Q86TM3 631 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 ARL14EPQ8N8R7 260 aaPredicted RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 HEXDCQ8WVB3 486 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 HERC2P3Q9BVR0 1158 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 CXorf21Q9HAI6 301 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 MRPL17Q9NRX2 175 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 CCM2LQ9NUG4 571 aaPredicted RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 TRIM64A6NGJ6 449 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 MROH6A6NGR9 719 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 SAC3D1A6NKF1 404 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 LDB2O43679 373 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 CBFA2T3O75081 653 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 ATE1O95260 518 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 LAG3P18627 525 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 RFC2P35250 354 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 CD151P48509 253 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 SLC7A2P52569 658 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 PITRM1Q5JRX3 1037 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 LINGO4Q6UY18 593 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 HACD2Q6Y1H2 254 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 PACRGLQ8N7B6 248 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 TRMT2BQ96GJ1 504 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 SLC39A3Q9BRY0 314 aa16.8■□□□□ 0.28
PHF1-202ENST00000374516 NPLQ9BXD5 320 aaPredicted RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 PAIP1Q9H074 479 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 GMPR2Q9P2T1 348 aaKnown RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 UBA2Q9UBT2 640 aaPredicted RBP16.8■□□□□ 0.28
PHF1-202ENST00000374516 CHD7Q9P2D1 2997 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 KANSL1LA0AUZ9 987 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 BOLA2-SMG1P6H3BVE0 249 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 SRP72O76094 671 aaKnown RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 SERPINF2P08697 491 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 HMOX2P30519 316 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 EPHB3P54753 998 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 MERTKQ12866 999 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 INTS11Q5TA45 600 aaKnown RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 RNF219Q5W0B1 726 aaPredicted RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 TNIP2Q8NFZ5 429 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 THAP11Q96EK4 314 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 VPS50Q96JG6 964 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 TBATAQ96M53 351 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 CINPQ9BW66 212 aaPredicted RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 MUC3BQ9H195 1237 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 C11orf49Q9H6J7 331 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 EML4Q9HC35 981 aaKnown RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 TMX2-CTNND1H3BSU7 103 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 KDELR3O43731 214 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 TFPTP0C1Z6 253 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 ZNF829Q3KNS6 432 aaPredicted RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 OR9I1Q8NGQ6 314 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 ZUFSPQ96AP4 578 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 ZNF599Q96NL3 588 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 SMIM14Q96QK8 99 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 ADI1Q9BV57 179 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 RPF2Q9H7B2 306 aaKnown RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 TBC1D23Q9NUY8 699 aa16.79■□□□□ 0.28
PHF1-202ENST00000374516 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.283e-9■■■□□ 16.8
PHF1-202ENST00000374516 MARCH4Q9P2E8 410 aaPredicted RBP16.79■□□□□ 0.28
PHF1-202ENST00000374516 A0A1B0GVM2 712 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 SEC24DO94855 1032 aaPredicted RBP16.78■□□□□ 0.28
PHF1-202ENST00000374516 C1RP00736 705 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 PORP16435 677 aaPredicted RBP16.78■□□□□ 0.28
PHF1-202ENST00000374516 ATP6V1B2P21281 511 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 PMS2P3Q13401 168 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 RPS27LQ71UM5 84 aaKnown RBP16.78■□□□□ 0.28
PHF1-202ENST00000374516 CUZD1Q86UP6 607 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 CPNE9Q8IYJ1 553 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 TCEAL8Q8IYN2 117 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 CARNMT1Q8N4J0 409 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 AFAP1L2Q8N4X5 818 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 COX4I2Q96KJ9 171 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 PSKH2Q96QS6 385 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 MGME1Q9BQP7 344 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 CYP4F12Q9HCS2 524 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 SEPT3Q9UH03 358 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 AURKCQ9UQB9 309 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 A0A087X1B8 175 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 ILVBLA1L0T0 632 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 TMEM221A6NGB7 291 aa16.78■□□□□ 0.28
PHF1-202ENST00000374516 H3BMQ9 156 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms