RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 PARP16Q8N5Y8 322 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 DNAAF3Q8N9W5 541 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 RDM1Q8NG50 284 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CYP4F12Q9HCS2 524 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 ERVK-18Q9QC07 812 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 PAPPA2Q9BXP8 1791 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 A0A0X1KG70 313 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 METTL15A6NJ78 407 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 G3V2T6 193 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 XPNPEP2O43895 674 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 HUS1O60921 280 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 NAGAP17050 411 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 HRH2P25021 359 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 PSMB9P28065 219 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 RAB10P61026 200 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 KCNAB2Q13303 367 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CLCA4Q14CN2 919 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 FAM83EQ2M2I3 478 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 VARS2Q5ST30 1063 aaKnown RBP12.83□□□□□ -0.36
PRPF4-201ENST00000374198 NXNL2Q5VZ03 156 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CLEC6AQ6EIG7 209 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 CEP97Q8IW35 865 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 ACER1Q8TDN7 264 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 RNF170Q96K19 258 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 C3orf30Q96M34 536 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 ELOVL4Q9GZR5 314 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 DCSTAMPQ9H295 470 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 C12orf4Q9NQ89 552 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 TOR4AQ9NXH8 423 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 PCDHGA10Q9Y5H3 936 aa12.83□□□□□ -0.36
PRPF4-201ENST00000374198 OAS3Q9Y6K5 1087 aaKnown RBP12.83□□□□□ -0.36
PRPF4-201ENST00000374198 FADS2P1A8MWK0 482 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 SSX4O60224 188 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 MYCLP12524 364 aaPredicted RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 CERCAMQ5T4B2 595 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 FKBP1CQ5VVH2 108 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 DPH6Q7L8W6 267 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 VN1R5Q7Z5H4 357 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 FAM83AQ86UY5 434 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 CLYBLQ8N0X4 340 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 MIER2Q8N344 545 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 NETO2Q8NC67 525 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 PJA1Q8NG27 643 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 PIK3R3Q92569 461 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 ZNF566Q969W8 418 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 TMEM176AQ96HP8 235 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 KCTD15Q96SI1 283 aaPredicted RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 C6orf62Q9GZU0 229 aaPredicted RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 KAT8Q9H7Z6 458 aaKnown RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 AKTIPQ9H8T0 292 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 SYTL2Q9HCH5 934 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 NSMCE4AQ9NXX6 385 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 DNMT3LQ9UJW3 386 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 A0A1W2PQ72 361 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 C12orf71A8MTZ7 269 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 EFCAB9A8MZ26 197 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 AP3D1O14617 1153 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 SHOXO15266 292 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 TSPAN9O75954 239 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 SEMA3DO95025 777 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 AHSGP02765 367 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 STMN1P16949 149 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 FMO4P31512 558 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 CTAG1AP78358 180 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 EMC2Q15006 297 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 TPRG1LQ5T0D9 272 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 SWSAP1Q6NVH7 229 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 ZNF598Q86UK7 904 aaKnown RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 DCP1BQ8IZD4 617 aaKnown RBP12.82□□□□□ -0.36
PRPF4-201ENST00000374198 TOR1AIP2Q8NFQ8 470 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 AFG1LQ8WV93 481 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 HEXDCQ8WVB3 486 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 C19orf60Q96EN9 201 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 BCO2Q9BYV7 579 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 CASS4Q9NQ75 786 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 EXD2Q9NVH0 621 aa12.82□□□□□ -0.36
PRPF4-201ENST00000374198 LOC100130705A0A1B0GUX0 176 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 NOBOXO60393 691 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 CNTN5O94779 1100 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 KCNA5P22460 613 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 MTHFRP42898 656 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 GLUD2P49448 558 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 NDST1P52848 882 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 PRKCDQ05655 676 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 FADDQ13158 208 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 NOGQ13253 232 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 CDK5R2Q13319 367 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 NFYCQ13952 458 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 GALNT3Q14435 633 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 FUT11Q495W5 492 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 COQ5Q5HYK3 327 aa12.81□□□□□ -0.36
PRPF4-201ENST00000374198 ZNF691Q5VV52 312 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms