RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 PCDH12Q9NPG4 1184 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 HOXA2O43364 376 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 HNRNPRO43390 633 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 IDO1P14902 403 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 POU1F1P28069 291 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 POLR2JP52435 117 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 FOXA1P55317 472 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 PWP1Q13610 501 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 TECRLQ5HYJ1 363 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MORN1Q5T089 497 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 RANBP10Q6VN20 620 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SERPINA9Q86WD7 417 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 RIBC2Q9H4K1 309 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OR2AG2A6NM03 316 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 K7ERQ8 282 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 DEAF1O75398 565 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 KRT6AP02538 564 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 KRT6BP04259 564 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 KRT6CP48668 564 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 CCT8P50990 548 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 GK3PQ14409 553 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 C18orf21Q32NC0 220 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 GLYATQ6IB77 296 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ADCY4Q8NFM4 1077 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 IMP4Q96G21 291 aaKnown RBP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ACAT2Q9BWD1 397 aa17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 COL11A1P12107 1806 aaPredicted RBP17.54■□□□□ 0.4
TRAF3IP1-201ENST00000373327 LIN7AO14910 233 aaPredicted RBP17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 AHCYL1O43865 530 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 EPB42P16452 691 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 S100A3P33764 101 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 TLR1Q15399 786 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ZDHHC13Q8IUH4 622 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 TRPV1Q8NER1 839 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MYO19Q96H55 970 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MFSD1Q9H3U5 465 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 COMMD8Q9NX08 183 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SCML2Q9UQR0 700 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MLYCDO95822 493 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 IGSF6O95976 241 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 INHAP05111 366 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 RPLP2P05387 115 aaKnown RBP17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ST8SIA6P61647 398 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SPIDRQ14159 915 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SLC2A7Q6PXP3 512 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OTOP2Q7RTS6 562 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 BPIFB6Q8NFQ5 453 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 APOLD1Q96LR9 279 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 C9orf16Q9BUW7 83 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 KATNBL1Q9H079 304 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 GREB1LQ9C091 1923 aaPredicted RBP17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 UPK3BL1B0FP48 263 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 UPK3BL2E5RIL1 263 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 S1PR4O95977 384 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SERPINA4P29622 427 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ATP6V0D1P61421 351 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 NADK2Q4G0N4 442 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 CST9Q5W186 159 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 GALNT5Q7Z7M9 940 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OR52E6Q96RD3 313 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ZSCAN9O15535 394 aaPredicted RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SERINC3Q13530 473 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 DMC1Q14565 340 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 DOK6Q6PKX4 331 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SH2D5Q6ZV89 423 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OR10A6Q8NH74 314 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ELMO1Q92556 727 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 PTERQ96BW5 349 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 TSGA13Q96PP4 275 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MRPL9Q9BYD2 267 aaKnown RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OAZ3Q9UMX2 235 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 FADS3Q9Y5Q0 445 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 A0A1B0GVM2 712 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 TCAF2A6NFQ2 919 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 CDK14O94921 469 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 RPL10P27635 214 aaKnown RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SH3BP2P78314 561 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OCA2Q04671 838 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ATP1A4Q13733 1029 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 OR4D1Q15615 310 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 PSAPL1Q6NUJ1 521 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 B3GNT6Q6ZMB0 384 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 SPPL2AQ8TCT8 520 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 NSUN3Q9H649 340 aaKnown RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ZNF490Q9ULM2 529 aaPredicted RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 CNOT6Q9ULM6 557 aaKnown RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 EI24O14681 340 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 WDR47O94967 919 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 CSKP41240 450 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 IRF8Q02556 426 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 PLA2G4EQ3MJ16 856 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 CLLU1OSQ5K130 101 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 ASB2Q96Q27 587 aa17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 MRPL17Q9NRX2 175 aaKnown RBP17.52■□□□□ 0.4
TRAF3IP1-201ENST00000373327 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms