RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 NEK2P51955 445 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 RABL3Q5HYI8 236 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 KIAA0408Q6ZU52 694 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 SETD3Q86TU7 594 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 BEND7Q8N7W2 519 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 ZFYVE19Q96K21 471 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 TSSK3Q96PN8 268 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 ZBTB18Q99592 522 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 IGSF5Q9NSI5 407 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 POLR3HQ9Y535 204 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 MRPS35P82673 323 aaKnown RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 FRG1Q14331 258 aaKnown RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 STARD3Q14849 445 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 SYTL3Q4VX76 610 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 LSMEM2Q8N112 164 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 HJURPQ8NCD3 748 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 CCDC154A6NI56 674 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 PDLIM1O00151 329 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 ZNF189O75820 626 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 CDK14O94921 469 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 IGSF6O95976 241 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 SERPINA4P29622 427 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 CHRNA6Q15825 494 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 LRRC23Q53EV4 343 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 IL23RQ5VWK5 629 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 REP15Q6BDI9 236 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 ZNF549Q6P9A3 640 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 GPRIN3Q6ZVF9 776 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 RDH11Q8TC12 318 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 LRCH3Q96II8 777 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 PRICKLE1Q96MT3 831 aaPredicted RBP13.09□□□□□ -0.31
NCDN-203ENST00000373253 SLC25A23Q9BV35 468 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 IPPKQ9H8X2 491 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 TREX1Q9NSU2 369 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 PKD2L2Q9NZM6 624 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
NCDN-203ENST00000373253 COL6A2P12110 1019 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CD70P32970 193 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CYS1Q717R9 158 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 OR56A4Q8NGH8 313 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 PSKH2Q96QS6 385 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 LINC00597Q9H2U6 94 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 U3KQV3 271 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 A0A1B0GTL3 188 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 NTRK1P04629 796 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 IL10P22301 178 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 HOXD9P28356 352 aaPredicted RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 ADRA1AP35348 466 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 PRKAA2P54646 552 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 FOLH1Q04609 750 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 UNC50Q53HI1 259 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 C11orf96Q7Z7L8 435 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 ZNF786Q8N393 782 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 KREMEN2Q8NCW0 462 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 PNPT1Q8TCS8 783 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 KLHL32Q96NJ5 620 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 TUBGCP5Q96RT8 1024 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 SIKE1Q9BRV8 207 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 GRIP2Q9C0E4 1043 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 ZNF334Q9HCZ1 680 aaPredicted RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CPSF4O95639 269 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 SBK3P0C264 359 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 ATXN1LP0C7T5 689 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 IMPDH1P20839 514 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 MAGEA11P43364 429 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 LEPRP48357 1165 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 RPS6KA3P51812 740 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CCNIQ14094 377 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CLEC4FQ8N1N0 589 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 PTCD2Q8WV60 388 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 SNX19Q92543 992 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 TMEM79Q9BSE2 394 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 AARSD1Q9BTE6 412 aaKnown RBP13.08□□□□□ -0.32
NCDN-203ENST00000373253 TRIM54Q9BYV2 358 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 CCDC90BQ9GZT6 254 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 OPTCQ9UBM4 332 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 SLC8A2Q9UPR5 921 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.32
NCDN-203ENST00000373253 TRAV19A0A0A6YYK7 116 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 A0A1B0GVG6 124 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 CLIC3O95833 236 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MMP2P08253 660 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 MTPNP58546 118 aa13.07□□□□□ -0.32
NCDN-203ENST00000373253 ACOX1Q15067 660 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms