RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SEC14L2O76054 403 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CDK14O94921 469 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 C1RP00736 705 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ALBP02768 609 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ABCB1P08183 1280 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MYCLP1P12525 358 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 BMP1P13497 986 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 INSRRP14616 1297 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TIMP2P16035 220 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 YBX3P16989 372 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 RPL17P18621 184 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TGM1P22735 817 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CRHBPP24387 322 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ATP5F1P24539 256 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PIK3CGP48736 1102 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 GLUD2P49448 558 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CSRP3P50461 194 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 HLCSP50747 726 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ARPP19P56211 112 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 BACE1P56817 501 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CXCL9Q07325 125 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CACNB2Q08289 660 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 INCA1Q0VD86 236 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TP53BP2Q13625 1128 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SIM2Q14190 667 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 RPS6KA2Q15349 733 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MAPRE1Q15691 268 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 BCL2A1Q16548 175 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SYT16Q17RD7 645 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PAN2Q504Q3 1202 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 UNC50Q53HI1 259 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ATAD3BQ5T9A4 648 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 IER5Q5VY09 327 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 DENND5AQ6IQ26 1287 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ZNF773Q6PK81 442 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SPESP1Q6UW49 350 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 OSTM1Q86WC4 334 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 GATAD2AQ86YP4 633 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SIX5Q8N196 739 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 C10orf111Q8N326 155 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CELF2-AS1Q8N7Q2 184 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PTGR2Q8N8N7 351 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TNIP2Q8NFZ5 429 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 OR6P1Q8NGX9 317 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SEPT1Q8WYJ6 367 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TMEM125Q96AQ2 219 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 KLHL5Q96PQ7 755 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 GPR20Q99678 358 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TDRD1Q9BXT4 1180 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TNKS2Q9H2K2 1166 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 VRTNQ9H8Y1 702 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 AMBNQ9NP70 447 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PLSCR3Q9NRY6 295 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ATAD3AQ9NVI7 634 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 DDIT4Q9NX09 232 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 IL37Q9NZH6 218 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MPP6Q9NZW5 540 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 GALPQ9UBC7 116 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 POLG2Q9UHN1 485 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 FBXO9Q9UK97 447 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 FBXO5Q9UKT4 447 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 BAG5Q9UL15 447 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 AGO1Q9UL18 857 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 UGT2A1Q9Y4X1 527 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ACTL7AQ9Y615 435 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 OAS3Q9Y6K5 1087 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SLC30A1Q9Y6M5 507 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SLC12A8A0AV02 714 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TRIM64A6NGJ6 449 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MEIS3P2A8K0S8 358 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ARVCFO00192 962 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 GPR39O43194 453 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 FADS2O95864 444 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MOCS2O96007 188 aaPredicted RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 LDLRP01130 860 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MSL3P1P0C860 447 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 HSPA8P11142 646 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PFKLP17858 780 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MATKP42679 507 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CRISP3P54108 245 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 COPZ1P61923 177 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CTAG1AP78358 180 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 RBP5P82980 135 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MVKQ03426 396 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 ENPEPQ07075 957 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 TRAP1Q12931 704 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 KCNAB2Q13303 367 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 OR4D1Q15615 310 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 GTDC1Q4AE62 458 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 CCNYL2Q5T2Q4 361 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 INTS11Q5TA45 600 aaKnown RBP5.38□□□□□ -1.55
ATG4A-204ENST00000372246 DEPDC1Q5TB30 811 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SPRED1Q7Z699 444 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PEX5LQ8IYB4 626 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 PHACTR4Q8IZ21 702 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 NLGN4XQ8N0W4 816 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 MFSD4AQ8N468 514 aa5.38□□□□□ -1.55
ATG4A-204ENST00000372246 SCAIQ8N9R8 606 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms