RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 RNASEH2AO75792 299 aaKnown RBP11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CKMT2P17540 419 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CD70P32970 193 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CBX2Q14781 532 aaPredicted RBP11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
PDE6C-201ENST00000371447 RABL3Q5HYI8 236 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SYVN1Q86TM6 617 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SORCS1Q8WY21 1168 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 DCUN1D1Q96GG9 259 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 TMEM74Q96NL1 305 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 BIRC8Q96P09 236 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 ATOH8Q96SQ7 321 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 EPS15L1Q9UBC2 864 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 POLG2Q9UHN1 485 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CRLS1Q9UJA2 301 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 ANGPTL3Q9Y5C1 460 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SLC4A7Q9Y6M7 1214 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 KNL1Q8NG31 2342 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 MTHFD1P11586 935 aaKnown RBP11.65□□□□□ -0.54
PDE6C-201ENST00000371447 ITGB8P26012 769 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 HK3P52790 923 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SQLEQ14534 574 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CTSL3PQ5NE16 218 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 IL27RAQ6UWB1 636 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SERPINA9Q86WD7 417 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 FUNDC1Q8IVP5 155 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CLHC1Q8NHS4 586 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 METTL6Q8TCB7 284 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 KLF16Q9BXK1 252 aaPredicted RBP11.65□□□□□ -0.54
PDE6C-201ENST00000371447 CLPBQ9H078 707 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 ZFP14Q9HCL3 533 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 MRPL17Q9NRX2 175 aaKnown RBP11.65□□□□□ -0.54
PDE6C-201ENST00000371447 ABCB8Q9NUT2 735 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 INSL5Q9Y5Q6 135 aa11.65□□□□□ -0.54
PDE6C-201ENST00000371447 SLC25A14O95258 325 aaPredicted RBP11.65□□□□□ -0.55
PDE6C-201ENST00000371447 CAPN3P20807 821 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 POLD2P49005 469 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 HTR6P50406 440 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 UFM1P61960 85 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 BCL2L1Q07817 233 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 TSTA3Q13630 321 aaPredicted RBP11.65□□□□□ -0.55
PDE6C-201ENST00000371447 FBXL19Q6PCT2 694 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 MILR1Q7Z6M3 343 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 RALGPS2Q86X27 583 aaPredicted RBP11.65□□□□□ -0.55
PDE6C-201ENST00000371447 PDZD8Q8NEN9 1154 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 JADE3Q92613 823 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 ZDHHC6Q9H6R6 413 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 MEAF6Q9HAF1 191 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 SLCO3A1Q9UIG8 710 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 CCL26Q9Y258 94 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 PRSS21Q9Y6M0 314 aa11.65□□□□□ -0.55
PDE6C-201ENST00000371447 SYNCRIPO60506 623 aaKnown RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 RFPL2O75678 378 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 SEC24DO94855 1032 aaPredicted RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 SOD2P04179 222 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 ARHGEF7Q14155 803 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 RARS2Q5T160 578 aaKnown RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 THEMIS2Q5TEJ8 643 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 GAREM2Q75VX8 874 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 TMEM150AQ86TG1 271 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 SETD3Q86TU7 594 aaPredicted RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 PDSS2Q86YH6 399 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 HERC6Q8IVU3 1022 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 ADGRG2Q8IZP9 1017 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 MRPS31Q92665 395 aaKnown RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 MYO19Q96H55 970 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 ZNF711Q9Y462 761 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 MAGEA13PA6NCF6 341 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 PITPNM1O00562 1244 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 STAMBPO95630 424 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 EPOP01588 193 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 PRDX6P30041 224 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 CCNHP51946 323 aaPredicted RBP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 HSPA14Q0VDF9 509 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 LCP2Q13094 533 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 NFYCQ13952 458 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 C6orf10Q5SRN2 563 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 AAGABQ6PD74 315 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 LARP4Q71RC2 724 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDE6C-201ENST00000371447 MIER2Q8N344 545 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 SEPHS2Q99611 448 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 BEGAINQ9BUH8 593 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 ZFYVE1Q9HBF4 777 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 SPAG4Q9NPE6 437 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 FNIP2Q9P278 1114 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 PSMD13Q9UNM6 376 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 PTPRDP23468 1912 aa11.64□□□□□ -0.55
PDE6C-201ENST00000371447 PDLIM1O00151 329 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 LRG1P02750 347 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 UGT2B4P06133 528 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CAPN1P07384 714 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 COL6A1P12109 1028 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 CR2P20023 1033 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TTPAP49638 278 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 DGKQP52824 942 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 PDK3Q15120 406 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 TLR1Q15399 786 aa11.63□□□□□ -0.55
PDE6C-201ENST00000371447 NR6A1Q15406 480 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms