RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 UNC80Q8N2C7 3258 aa15.31■□□□□ 0.04
SEMA6C-202ENST00000368912 ATP8B3O60423 1300 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 MATN1P21941 496 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 GABRB3P28472 473 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 IL1RL1Q01638 556 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 POLD3Q15054 466 aaPredicted RBP15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 AASDHQ4L235 1098 aaPredicted RBP15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 CRTC3Q6UUV7 619 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 CFAP52Q8N1V2 620 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 SNAPC3Q92966 411 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 PPP1R36Q96LQ0 422 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 PER2O15055 1255 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 TPST1O60507 370 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 AMHP03971 560 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 ALDH4A1P30038 563 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 ROR1Q01973 937 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 TMEM199Q8N511 208 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 ZMIZ2Q8NF64 920 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 TMEM174Q8WUU8 243 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 ST8SIA2Q92186 375 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 PRRG3Q9BZD7 231 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 REXO4Q9GZR2 422 aaKnown RBP15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 KLF15Q9UIH9 416 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 TLL1O43897 1013 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 URODP06132 367 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 COX4I1P13073 169 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 GDF10P55107 478 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 SESN2P58004 480 aaPredicted RBP15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 PID1Q7Z2X4 250 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 SPRED2Q7Z698 418 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 HORMAD1Q86X24 394 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 CARM1Q86X55 608 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 COLGALT2Q8IYK4 626 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 PJA1Q8NG27 643 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 TRIM43Q96BQ3 446 aaPredicted RBP15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 APOPT1Q96IL0 206 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 USB1Q9BQ65 265 aaKnown RBP15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
SEMA6C-202ENST00000368912 APOA1P02647 267 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 UGT2B4P06133 528 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 MYOGP15173 224 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 HNF1BP35680 557 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 C19orf57Q0VDD7 668 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 CORO6Q6QEF8 472 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 OR2T3Q8NH03 318 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 PABPC5Q96DU9 382 aaKnown RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 I3L521 148 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 HTRA2O43464 458 aaPredicted RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 PSKH1P11801 424 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 MRPL28Q13084 256 aaKnown RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 C16orf46Q6P387 395 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 ARCQ7LC44 396 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 TFB1MQ8WVM0 346 aaKnown RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 C1orf74Q96LT6 269 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 ZNF558Q96NG5 402 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 TRIM15Q9C019 465 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 ATXN3LQ9H3M9 355 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 VRTNQ9H8Y1 702 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 TMEM9Q9P0T7 183 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 OGDHLQ9ULD0 1010 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 MYO18AQ92614 2054 aaKnown RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 E7ENX8 843 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 AGRPO00253 132 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 SAT1P21673 171 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 GAD2Q05329 585 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 BNIP2Q12982 314 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 TFDP2Q14188 446 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 SLX4IPQ5VYV7 408 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 RSPO2Q6UXX9 243 aaPredicted RBP15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 LURAP1LQ8IV03 231 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 PARP8Q8N3A8 854 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 CCNYL1Q8N7R7 359 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 FBXO22Q8NEZ5 403 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 SUSD3Q96L08 255 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 IGFLR1Q9H665 355 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 CPNE7Q9UBL6 633 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 MAN2B2Q9Y2E5 1009 aa15.29■□□□□ 0.04
SEMA6C-202ENST00000368912 hCG_1818297A0A087WSY0 165 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 KRT87PA6NCN2 255 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 PRKD3O94806 890 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 RPLP2P05387 115 aaKnown RBP15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 ZNF26P17031 533 aaPredicted RBP15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 HOXC8P31273 242 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 CTNNB1P35222 781 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 MATKP42679 507 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 PLCL1Q15111 1095 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 ATAD3CQ5T2N8 411 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 SHEQ5VZ18 495 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 AMIGO1Q86WK6 493 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 CHSY1Q86X52 802 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 RNF135Q8IUD6 432 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 LGI2Q8N0V4 545 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 ZNF276Q8N554 614 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 SNX31Q8N9S9 440 aa15.28■□□□□ 0.04
SEMA6C-202ENST00000368912 RAB2BQ8WUD1 216 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms