RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 SP140Q13342 867 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 CRY2Q49AN0 593 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 MSANTD2Q6P1R3 559 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 LIX1Q8N485 282 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 FAM81AQ8TBF8 368 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 NECTIN3Q9NQS3 549 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 IDO1P14902 403 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 ARHGDIBP52566 201 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 HYAL2Q12891 473 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 UBAP2Q5T6F2 1119 aaKnown RBP18.05■□□□□ 0.48
SNX27-202ENST00000368841 FUKQ8N0W3 1084 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 TWIST2Q8WVJ9 160 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 METTL21AQ8WXB1 218 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 PCDHGC4Q9Y5F7 938 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 RPTORQ8N122 1335 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 SNX3O60493 162 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 CABYRO75952 493 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 IFNGP01579 166 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 IL12BP29460 328 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 ALDH4A1P30038 563 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 BNC1Q01954 994 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 PITRM1Q5JRX3 1037 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 RTL4Q6ZR62 310 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 CIB1Q99828 191 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 FTHL17Q9BXU8 183 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 PGRMC2O15173 223 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 GNRH1P01148 92 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 SERPINA6P08185 405 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 COL6A1P12109 1028 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 ERVK-21P61565 698 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 FASTKD3Q14CZ7 662 aaKnown RBP18.05■□□□□ 0.48
SNX27-202ENST00000368841 REP15Q6BDI9 236 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 SLC4A11Q8NBS3 891 aa18.05■□□□□ 0.48
SNX27-202ENST00000368841 HCN1O60741 890 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 PTPN9P43378 593 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 KLHL32Q96NJ5 620 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 GFM1Q96RP9 751 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 RNPEPL1Q9HAU8 725 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 RHPN2P1A8MT19 583 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 TPD52L2O43399 206 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 RPP40O75818 363 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 CSN2P05814 226 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 OR5T3Q8NGG3 340 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 LRTM1Q9HBL6 345 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 PNO1Q9NRX1 252 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 NCANO14594 1321 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 SHOX2O60902 331 aaPredicted RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 CCNDBP1O95273 360 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 FGBP02675 491 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 RNF43Q68DV7 783 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 GALNT13Q8IUC8 556 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 RP9Q8TA86 221 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 RSL24D1Q9UHA3 163 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 DEPDC5O75140 1603 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 WNT7AO00755 349 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 SEMA3DO95025 777 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 CCR10P46092 362 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 PSEN1P49768 467 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 TTC23Q5W5X9 447 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 RGMBQ6NW40 437 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 XYLT1Q86Y38 959 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 SMG7Q92540 1137 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 AIF1LQ9BQI0 150 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 ING3Q9NXR8 418 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 MARK1Q9P0L2 795 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 UBIAD1Q9Y5Z9 338 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 UNC5CO95185 931 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 IFNA6P05013 189 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 GLUD2P49448 558 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 HSF2Q03933 536 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 ESRP1Q6NXG1 681 aaKnown RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 ZNF366Q8N895 744 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 ARL14EPQ8N8R7 260 aaPredicted RBP18.04■□□□□ 0.48
SNX27-202ENST00000368841 OR7D4Q8NG98 312 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 LRMDAQ9H2I8 198 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 SNX20Q7Z614 316 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 HID1Q8IV36 788 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 TCF12Q99081 682 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 PTPRUQ92729 1446 aa18.04■□□□□ 0.48
SNX27-202ENST00000368841 ARL5AQ9Y689 179 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 FAM172BPA6NC97 362 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 PCP4L1A6NKN8 68 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 A8MU76 341 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 GNPDA1P46926 289 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 AKR1D1P51857 326 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 MEIOBQ8N635 442 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 CPXM1Q96SM3 734 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 PCDHB18PQ96TA0 734 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 CHIAQ9BZP6 476 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 PCYOX1Q9UHG3 505 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 SLC15A5A6NIM6 579 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 ARHGEF33A8MVX0 844 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 LYNP07948 512 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 MNDAP41218 407 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 SLC13A2Q13183 592 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 GTF2H2Q13888 395 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 UBXN2BQ14CS0 331 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 SLC25A52Q3SY17 297 aa18.03■□□□□ 0.48
SNX27-202ENST00000368841 GTF2H2CQ6P1K8 395 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms