RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 C22orf39Q6P5X5 142 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 C19orf48Q6RUI8 117 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 RAB44Q7Z6P3 723 aaPredicted RBP8.76□□□□□ -1.01
SNX27-201ENST00000368838 PPM1NQ8N819 430 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 C2CD4AQ8NCU7 369 aaPredicted RBP8.76□□□□□ -1.01
SNX27-201ENST00000368838 OR2T3Q8NH03 318 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 RAB3IL1Q8TBN0 382 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 FRS2Q8WU20 508 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 SCRN2Q96FV2 425 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CFAP36Q96G28 342 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 MYO19Q96H55 970 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 NSMCE3Q96MG7 304 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 GPR22Q99680 433 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CAPS2Q9BXY5 557 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 CDH19Q9H159 772 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 ATP13A3Q9H7F0 1226 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 PRSS16Q9NQE7 514 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 TM7SF3Q9NS93 570 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 UBP1Q9NZI7 540 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 TXNDC16Q9P2K2 825 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 PHTF1Q9UMS5 762 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 BTBD3Q9Y2F9 522 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 SNX11Q9Y5W9 270 aa8.76□□□□□ -1.01
SNX27-201ENST00000368838 LAMA5O15230 3695 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 URB1O60287 2271 aaKnown RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 FREM2Q5SZK8 3169 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CELSR3Q9NYQ7 3312 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 A0A0J9YYE9 177 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 TMEM120BA0PK00 339 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 C2orf81A6NN90 581 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 KLF11O14901 512 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ASMTLO95671 621 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 SEMA4FO95754 770 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 MT-CO1P00395 513 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 TRBC1P01850 177 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 MT-ND3P03897 115 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 MPOP05164 745 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ITGA2BP08514 1039 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 POLR2EP19388 210 aaKnown RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 LPOP22079 712 aaPredicted RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 NMBRP28336 390 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 OXTRP30559 389 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CTSOP43234 321 aaPredicted RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 ETV4P43268 484 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CHRNA4P43681 627 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CCT5P48643 541 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ZNF140P52738 457 aaPredicted RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 BCL2L1Q07817 233 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ITKQ08881 620 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 AGERQ15109 404 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ZKSCAN8Q15776 578 aaPredicted RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 CNGA3Q16281 694 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CDKN3Q16667 212 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 KIF19Q2TAC6 998 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 HP1BP3Q5SSJ5 553 aaPredicted RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 PRAMEF14Q5SWL7 426 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ARMC12Q5T9G4 340 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 NEPROQ6NW34 567 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ESRP1Q6NXG1 681 aaKnown RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 BRAT1Q6PJG6 821 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 KYAT3Q6YP21 454 aaKnown RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 NLRP8Q86W28 1048 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ZC3HC1Q86WB0 502 aaKnown RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 TTC30BQ8N4P2 665 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ZNF511Q8NB15 262 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CADM4Q8NFZ8 388 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 UHMK1Q8TAS1 419 aaKnown RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 GRIN3AQ8TCU5 1115 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 GANCQ8TET4 914 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 BIRC7Q96CA5 298 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 CDKN2AIPNLQ96HQ2 116 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 APOPT1Q96IL0 206 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 TMEM245Q9H330 911 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 POPDC3Q9HBV1 291 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 C20orf96Q9NUD7 363 aaPredicted RBP8.75□□□□□ -1.01
SNX27-201ENST00000368838 IL17CQ9P0M4 197 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 DCDC2Q9UHG0 476 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 PCOLCE2Q9UKZ9 415 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 PLA2G4CQ9UP65 541 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 ERVW-1Q9UQF0 538 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 COMMD10Q9Y6G5 202 aa8.75□□□□□ -1.01
SNX27-201ENST00000368838 TRPM6Q9BX84 2022 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 FAM149AA5PLN7 773 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 TMEM8BA6NDV4 472 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 CAPN8A6NHC0 703 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 TRIM49D1C9J1S8 452 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 POLR3GO15318 223 aaPredicted RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 BIRC5O15392 142 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 SMAD6O43541 496 aaKnown RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 CBFA2T3O75081 653 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 TRIM16O95361 564 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 IGLV3-19P01714 112 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 DNTTP04053 509 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 ALDOAP04075 364 aaKnown RBP8.74□□□□□ -1.01
SNX27-201ENST00000368838 ZNF30P17039 623 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 TPH1P17752 444 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 KRT4P19013 534 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 MAPK1P28482 360 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 LSP1P33241 339 aa8.74□□□□□ -1.01
SNX27-201ENST00000368838 SCTRP47872 440 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms