RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ZNHIT2Q9UHR6 403 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 APPL1Q9UKG1 709 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 DOLKQ9UPQ8 538 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 TCAF1Q9Y4C2 921 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 MED19A0JLT2 244 aaPredicted RBP14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 OR51F1A6NGY5 319 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 GOLGA8MH3BSY2 632 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CCDC188H7C350 402 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 AVILO75366 819 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 MGAT1P26572 445 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 HADHAP40939 763 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 ACADVLP49748 655 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 MRPS25P82663 173 aaKnown RBP14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CDK16Q00536 496 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 NFATC2Q13469 925 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CCDC157Q569K6 752 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 TSTD2Q5T7W7 516 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZCCHC8Q6NZY4 707 aaKnown RBP14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 LRRC8BQ6P9F7 803 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CRTC3Q6UUV7 619 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CAND1Q86VP6 1230 aaKnown RBP14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 GKN2Q86XP6 184 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 SLC35F3Q8IY50 421 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 DDHD1Q8NEL9 900 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 OR13J1Q8NGT2 312 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 NAT14Q8WUY8 206 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CDKN2AIPNLQ96HQ2 116 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 C19orf43Q9BQ61 176 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 TRIM51Q9BSJ1 452 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 SMOXQ9NWM0 555 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 SYBUQ9NX95 663 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 ASIC3Q9UHC3 531 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 CACNA1AO00555 2505 aa14.91□□□□□ -0.02
SMPDL3A-201ENST00000368440 HEATR9A2RTY3 570 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 H7C0S8 307 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 TTI1O43156 1089 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 ADRA1DP25100 572 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 PSMA3P25788 255 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 DR1Q01658 176 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 PLA2G4EQ3MJ16 856 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 SLC30A9Q6PML9 568 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 CHST15Q7LFX5 561 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 NAT8LQ8N9F0 302 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 FAM181AQ8N9Y4 354 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 KYQ8NBH2 561 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 KRT12Q99456 494 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 CHRAC1Q9NRG0 131 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 SPATS2LQ9NUQ6 558 aaKnown RBP14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 GPR34Q9UPC5 381 aa14.9□□□□□ -0.02
SMPDL3A-201ENST00000368440 AGAP14A8MT82 685 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 DYNC1I1O14576 645 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CHUKO15111 745 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 GRID2O43424 1007 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CKMT2P17540 419 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 IVDP26440 423 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 DAB2P98082 770 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 TMEM115Q12893 351 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ILF3Q12906 894 aaKnown RBP eCLIP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 RNASEH2BQ5TBB1 312 aaKnown RBP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZNF547Q8IVP9 402 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 MPP5Q8N3R9 675 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 RASGEF1AQ8N9B8 481 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 FAM46DQ8NEK8 389 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 SPATA4Q8NEY3 305 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 PPHLN1Q8NEY8 458 aaKnown RBP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 GSDMCQ9BYG8 508 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 RMI1Q9H9A7 625 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 KCNK6Q9Y257 313 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ARHGEF17Q96PE2 2063 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CCDC162PA2VCL2 907 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 B4DGG1 531 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 DNALI1O14645 258 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 VEGFDO43915 354 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 DKK1O94907 266 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CDK14O94921 469 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 TOP3BO95985 862 aaKnown RBP14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CKMT1AP12532 417 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ACP5P13686 325 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ITGALP20701 1170 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ACTR1BP42025 376 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CTSCP53634 463 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ACTR1AP61163 376 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 B4GALNT1Q00973 533 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ACVR1Q04771 509 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 ZRANB3Q5FWF4 1079 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 PCID2Q5JVF3 399 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 LDLRAP1Q5SW96 308 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 GUSBP11Q6P575 273 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 LVRNQ6Q4G3 990 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 SNX20Q7Z614 316 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 PIANPQ8IYJ0 282 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 SDR16C5Q8N3Y7 309 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 SERPINB12Q96P63 405 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 IL22Q9GZX6 179 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 BFARQ9NZS9 450 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 TAAR2Q9P1P5 351 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 GULP1Q9UBP9 304 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 SLC23A2Q9UGH3 650 aa14.89□□□□□ -0.03
SMPDL3A-201ENST00000368440 CRLS1Q9UJA2 301 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms