RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 COL6A1P12109 1028 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CAPZA2P47755 286 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 BLVRAP53004 296 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PRKCQQ04759 706 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 SLC20A2Q08357 652 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CBX2Q14781 532 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 INTS11Q5TA45 600 aaKnown RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 METTL21CQ5VZV1 264 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 RINLQ6ZS11 566 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 C17orf64Q86WR6 236 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 OR10T2Q8NGX3 314 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ACDQ96AP0 544 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ASB3Q9Y575 518 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 INSL6Q9Y581 213 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 KCTD3Q9Y597 815 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 A0A088AWK7 358 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 NDUFS2O75306 463 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 BMP10O95393 424 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 HAPLN1P10915 354 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ZNF10P21506 573 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 KRT20P35900 424 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 FPGSQ05932 587 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 EIF2B5Q13144 721 aaKnown RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 ZDHHC20Q5W0Z9 365 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PAGE2Q7Z2X7 111 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 CPSF7Q8N684 471 aaKnown RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 NELL1Q92832 810 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 MFSD1Q9H3U5 465 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 DDX28Q9NUL7 540 aaKnown RBP12.22□□□□□ -0.45
PTPRK-203ENST00000368207 DNAJC28Q9NX36 388 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 SOHLH2Q9NX45 425 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 PRDM4Q9UKN5 801 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 KLHL20Q9Y2M5 609 aa12.22□□□□□ -0.45
PTPRK-203ENST00000368207 LINC00854A0A1B0GVQ3 168 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 A0A1W2PQ67 120 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 PTGESO14684 152 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 OGNP20774 298 aaKnown RBP12.21□□□□□ -0.45
PTPRK-203ENST00000368207 TYW3Q6IPR3 259 aaKnown RBP12.21□□□□□ -0.45
PTPRK-203ENST00000368207 KRT73Q86Y46 540 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 CLVS1Q8IUQ0 354 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-203ENST00000368207 COLGALT2Q8IYK4 626 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 SPACA7Q96KW9 195 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 SIGLEC10Q96LC7 697 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 TMEM175Q9BSA9 504 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 PSMD13Q9UNM6 376 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 AP3M1Q9Y2T2 418 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 FAM159BA6NKW6 160 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 GABRDO14764 452 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 FFAR2O15552 330 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 TOP3BO95985 862 aaKnown RBP12.21□□□□□ -0.45
PTPRK-203ENST00000368207 AHSGP02765 367 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 IDH3AP50213 366 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 ALFQ53S48 1182 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 PIGWQ7Z7B1 504 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 PHYKPLQ8IUZ5 450 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 PNPT1Q8TCS8 783 aaKnown RBP12.21□□□□□ -0.45
PTPRK-203ENST00000368207 CCDC28BQ9BUN5 200 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 RAD21L1Q9H4I0 556 aa12.21□□□□□ -0.45
PTPRK-203ENST00000368207 KRCC1Q9NPI7 259 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-203ENST00000368207 PIP5K1BO14986 540 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 TM7SF2O76062 418 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 SIX3O95343 332 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 PCCBP05166 539 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 AQP1P29972 269 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 MAT2AP31153 395 aaKnown RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 CCR4P51679 360 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 SEC13P55735 322 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 TCEAL1Q15170 157 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 C17orf99Q6UX52 265 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 CASP12Q6UXS9 341 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 LYSMD3Q7Z3D4 306 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 CDK20Q8IZL9 346 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 SKA1Q96BD8 255 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 APOL4Q9BPW4 351 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 FAIM2Q9BWQ8 316 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 GTF2A1LQ9UNN4 478 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 ZNF623O75123 536 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 MTX2O75431 263 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 EDN1P05305 212 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 NOS3P29474 1203 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 TLX1P31314 330 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 RFTN1Q14699 578 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 LACTB2Q53H82 288 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 LPCAT4Q643R3 524 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 TMEM198Q66K66 360 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 TMEM220Q6QAJ8 160 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 KLK6Q92876 244 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 DENND2DQ9H6A0 471 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 NUDT4Q9NZJ9 180 aa12.21□□□□□ -0.46
PTPRK-203ENST00000368207 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-203ENST00000368207 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SLC31A1O15431 190 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PGM3O95394 542 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 SSR2P43308 183 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 BNIP2Q12982 314 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PLEKHG4Q58EX7 1191 aa12.2□□□□□ -0.46
PTPRK-203ENST00000368207 PRR23CQ6ZRP0 262 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms