RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 FBXL22Q6P050 247 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 AAGABQ6PD74 315 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 FSTL5Q8N475 847 aaPredicted RBP16.4■□□□□ 0.22
SCAF8-201ENST00000367178 SLC35F5Q8WV83 523 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 MCMBPQ9BTE3 642 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 RAB23Q9ULC3 237 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 TRBV23OR9-2A0A075B6M9 112 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 GRIN2DO15399 1336 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 COL6A1P12109 1028 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 MSX2P35548 267 aaPredicted RBP16.4■□□□□ 0.22
SCAF8-201ENST00000367178 BUD31P41223 144 aaPredicted RBP16.4■□□□□ 0.22
SCAF8-201ENST00000367178 MTAPQ13126 283 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 AUTS2Q8WXX7 1259 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 RIPOR3Q96MK2 946 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 C11orf49Q9H6J7 331 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 SLC28A2O43868 658 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 TCF4P15884 667 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 JAK1P23458 1154 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 HOXD13P35453 343 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 PTSQ03393 145 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 TIMM50Q3ZCQ8 353 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 IL23RQ5VWK5 629 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 NEK10Q6ZWH5 1172 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 RNF44Q7L0R7 432 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 MCCC1Q96RQ3 725 aaPredicted RBP16.4■□□□□ 0.22
SCAF8-201ENST00000367178 DNAJC28Q9NX36 388 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 GULP1Q9UBP9 304 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 GOLGA4Q13439 2230 aaKnown RBP16.4■□□□□ 0.22
SCAF8-201ENST00000367178 SNAP91O60641 907 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 CSKP41240 450 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 CCR3P51677 355 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 CHN2P52757 468 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 FPGSQ05932 587 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 SLC44A4Q53GD3 710 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 CEP78Q5JTW2 689 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 CCNYL2Q5T2Q4 361 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 ARMC4Q5T2S8 1044 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 VWA5B1Q5TIE3 1220 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 HFE2Q6ZVN8 426 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 PROSER1Q86XN7 944 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 HERVK_113Q902F9 699 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 TLCD1Q96CP7 247 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 INTS7Q9NVH2 962 aaKnown RBP16.4■□□□□ 0.22
SCAF8-201ENST00000367178 IKZF3Q9UKT9 509 aa16.4■□□□□ 0.22
SCAF8-201ENST00000367178 ATXN2Q99700 1313 aaKnown RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CHURC1-FNTBB4DL54 471 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 OR10H3O60404 316 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 SIN3BO75182 1162 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 NSG1P42857 185 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 ASMTP46597 345 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 POLR2JP52435 117 aaKnown RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 SLC9A5Q14940 896 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 C9orf64Q5T6V5 341 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 NCBP2-AS2Q69YL0 99 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CCSER2Q9H7U1 834 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CIDEBQ9UHD4 219 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 SMIM31A0A1B0GVY4 71 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 ABHD14A-ACY1A0A1B0GW23 586 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 GSTM5P46439 218 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 SPIBQ01892 262 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 ZNF460Q14592 562 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CNKSR3Q6P9H4 555 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 GPR135Q8IZ08 494 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 TMEM175Q9BSA9 504 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 FNDC11Q9BVV2 318 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 DDX18Q9NVP1 670 aaKnown RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 INSL6Q9Y581 213 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 PIPSLA2A3N6 862 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 GABRDO14764 452 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 ITGA1P56199 1179 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 ILF3Q12906 894 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■□□□□ 10.9
SCAF8-201ENST00000367178 ABRAXAS1Q6UWZ7 409 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 ZDHHC24Q6UX98 284 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 PNPLA8Q9NP80 782 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CNTN6Q9UQ52 1028 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 TSC22D4Q9Y3Q8 395 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 N6AMT1Q9Y5N5 214 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 GSC2O15499 205 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 SLC1A2P43004 574 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 CLK3P49761 638 aaKnown RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 OLFML1Q6UWY5 402 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 OSTM1Q86WC4 334 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 GPR88Q9GZN0 384 aa16.39■□□□□ 0.21
SCAF8-201ENST00000367178 PAPOLBQ9NRJ5 636 aaKnown RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 POLR3BQ9NW08 1133 aaPredicted RBP16.39■□□□□ 0.21
SCAF8-201ENST00000367178 A0A1B0GW55 424 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 OR6B1O95007 311 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DUX4L2P0CJ85 424 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DUX4L3P0CJ86 424 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DUX4L4P0CJ87 422 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DUX4L5P0CJ88 424 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DUX4L6P0CJ89 424 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DUX4L7P0CJ90 424 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 BMP7P18075 431 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 DEPDC4Q8N2C3 294 aa16.38■□□□□ 0.21
SCAF8-201ENST00000367178 RBM15BQ8NDT2 890 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms