RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 LIPEQ05469 1076 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 VSTM1Q6UX27 236 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 RAB11FIP2Q7L804 512 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 HDAC10Q969S8 669 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 C1GALT1C1Q96EU7 318 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 PTCD3Q96EY7 689 aaKnown RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 NIF3L1Q9GZT8 377 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 METTL8Q9H825 291 aaKnown RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 TAS2R9Q9NYW1 312 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 H3BUI4 141 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 KMOO15229 486 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 FARS2O95363 451 aaKnown RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 IDO1P14902 403 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 LHCGRP22888 699 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 RPS3AP61247 264 aaKnown RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CTXN3Q4LDR2 81 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 SETMARQ53H47 684 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 HIST2H2ABQ8IUE6 130 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 PM20D2Q8IYS1 436 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 FCRL4Q96PJ5 515 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 AIF1LQ9BQI0 150 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ASF1AQ9Y294 204 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 B8ZZF3 427 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 S100A3P33764 101 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ILDR2Q71H61 639 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 AMIGO1Q86WK6 493 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 EBF4Q9BQW3 602 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CYTH4Q9UIA0 394 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ATP6AP2A0A1C7CYW4 349 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 NUAK1O60285 661 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 AP1S1P61966 158 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 SEZ6Q53EL9 994 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 NPNTQ6UXI9 565 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 OMDQ99983 421 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 RAB23Q9ULC3 237 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 DRG1Q9Y295 367 aaKnown RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 PCDHB2Q9Y5E7 798 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 PSMD9O00233 223 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 EI24O14681 340 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 RP2O75695 350 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 MILR1Q7Z6M3 343 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 SLFN11Q7Z7L1 901 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 AGPAT3Q9NRZ7 376 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 MED11Q9P086 117 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 JCADQ9P266 1359 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CASTOR2A6NHX0 329 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 LCN1P31025 176 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 MC1RQ01726 317 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 SUSD4Q5VX71 490 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 IL27RAQ6UWB1 636 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CPB2Q96IY4 423 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 NANSQ9NR45 359 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 OAZ3Q9UMX2 235 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 LIASO43766 372 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 PRH1P02810 166 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 RD3LP0DJH9 198 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CYP2F1P24903 491 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 GALNT1Q10472 559 aaPredicted RBP11□□□□□ -0.65
CDC42BPA-205ENST00000366769 VPS26BQ4G0F5 336 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 XKR3Q5GH77 459 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 C16orf86Q6ZW13 317 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF248Q8NDW4 579 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 CBWD1Q9BRT8 395 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNF416Q9BWM5 594 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 TMEM8AQ9HCN3 771 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 COMMD3Q9UBI1 195 aa11□□□□□ -0.65
CDC42BPA-205ENST00000366769 COX7A2P14406 83 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 RORCP51449 518 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 PDIA5Q14554 519 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 POU4F3Q15319 338 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 PSMD5Q16401 504 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 PTCHD4Q6ZW05 846 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 NDNFQ8TB73 568 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 MED30Q96HR3 178 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 SEMA4BQ9NPR2 832 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 ACTR10Q9NZ32 417 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 CDC14AQ9UNH5 594 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 FRMPD1Q5SYB0 1578 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 A0A075B6Q4 140 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 SLC35F4A4IF30 521 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 LYPLA2O95372 231 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 HSD3B1P14060 373 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 RAB5BP61020 215 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 PARGQ86W56 976 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 METTL4Q8N3J2 472 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZSCAN1Q8NBB4 408 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 CSGALNACT1Q8TDX6 532 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 GPN3Q9UHW5 284 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 FMN2Q9NZ56 1722 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 VDRP11473 427 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 IGFBP4P22692 258 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 CPT1AP50416 773 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 ZNHIT3Q15649 155 aaPredicted RBP10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 POMZP3Q6PJE2 187 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 FBXO39Q8N4B4 442 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 LRRC40Q9H9A6 602 aa10.99□□□□□ -0.65
CDC42BPA-205ENST00000366769 AGLP35573 1532 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms