RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 CCNI2Q6ZMN8 369 aaPredicted RBP17.71■□□□□ 0.43
CLK2-202ENST00000361168 PHYKPLQ8IUZ5 450 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 OR56A4Q8NGH8 313 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 DTX3LQ8TDB6 740 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 SGF29Q96ES7 293 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 GTPBP2Q9BX10 602 aaKnown RBP17.71■□□□□ 0.43
CLK2-202ENST00000361168 CYP4F12Q9HCS2 524 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 SMYD2Q9NRG4 433 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 PHPT1Q9NRX4 125 aaPredicted RBP17.71■□□□□ 0.43
CLK2-202ENST00000361168 CATSPERZQ9NTU4 200 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 SMOXQ9NWM0 555 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 NCDNQ9UBB6 729 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
CLK2-202ENST00000361168 GMEB2Q9UKD1 530 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 SLC6A14Q9UN76 642 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 PLEKHM1Q9Y4G2 1056 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 PCDH15Q96QU1 1955 aa17.71■□□□□ 0.43
CLK2-202ENST00000361168 TMEM131Q92545 1883 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 PRR5-ARHGAP8B1AHC4 643 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 SDC3O75056 442 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ENGP17813 658 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ACRV1P26436 265 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 TEAD1P28347 426 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 CTSCP53634 463 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 TMEM115Q12893 351 aaPredicted RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 SHBQ15464 509 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 LONRF1Q17RB8 773 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 HLA-BQ31612 363 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 NEPROQ6NW34 567 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 MACC1Q6ZN28 852 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 C3orf62Q6ZUJ4 267 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 KCNMB4Q86W47 210 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ZNF547Q8IVP9 402 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 BEND7Q8N7W2 519 aaPredicted RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 RASGEF1AQ8N9B8 481 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 DDHD1Q8NEL9 900 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 PARD6BQ9BYG5 372 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 CDC42EP4Q9H3Q1 356 aaKnown RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 PPANQ9NQ55 473 aaKnown RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 DNAJC28Q9NX36 388 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 SUFUQ9UMX1 484 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 PRSS21Q9Y6M0 314 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 TDRD6O60522 2096 aaKnown RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 OR2AG2A6NM03 316 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ARHGAP33O14559 1287 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 SGTAO43765 313 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 GDF9O60383 454 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 C1QAP02745 245 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ZNF806P0C7X5 589 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ABCG1P45844 678 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 KIAA1024LP59773 190 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 OVGP1Q12889 678 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 TEAD4Q15561 434 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 FASTKD1Q53R41 847 aaKnown RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 SPANXN3Q5MJ09 141 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 PDPK2PQ6A1A2 396 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 ZNF470Q6ECI4 717 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 HID1Q8IV36 788 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 PALM2Q8IXS6 379 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 CCL4L1Q8NHW4 92 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 CEP76Q8TAP6 659 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 CERS2Q96G23 380 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 WDR92Q96MX6 357 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 NAT9Q9BTE0 207 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 TRIM39Q9HCM9 518 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 IARS2Q9NSE4 1012 aaKnown RBP17.7■□□□□ 0.42
CLK2-202ENST00000361168 NINJ2Q9NZG7 142 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 SLC17A4Q9Y2C5 497 aa17.7■□□□□ 0.42
CLK2-202ENST00000361168 TCRBV9S1A1TA0A576 114 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 PRSS38A1L453 326 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 KHNYNO15037 678 aaKnown RBP17.69■□□□□ 0.42
CLK2-202ENST00000361168 EIF3HO15372 352 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLK2-202ENST00000361168 DNAJC6O75061 913 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 CDK14O94921 469 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 HTR1BP28222 390 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 AKT1P31749 480 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 SLC1A2P43004 574 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 SRP54P61011 504 aaKnown RBP17.69■□□□□ 0.42
CLK2-202ENST00000361168 BNIP3Q12983 259 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 C1orf61Q13536 156 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 GPR33Q49SQ1 333 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 PARGQ86W56 976 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 OTUD6BQ8N6M0 293 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 RUBCNQ92622 972 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 MOCS1Q9NZB8 636 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 KLQ9UEF7 1012 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 PSAT1Q9Y617 370 aa17.69■□□□□ 0.42
CLK2-202ENST00000361168 CXorf49A8MYA2 514 aaPredicted RBP17.68■□□□□ 0.42
CLK2-202ENST00000361168 ACSL3O95573 720 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 TTC4O95801 387 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 HOXC4P09017 264 aaPredicted RBP17.68■□□□□ 0.42
CLK2-202ENST00000361168 PAMP19021 973 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 GABRB3P28472 473 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 MPP1Q00013 466 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 EFTUD2Q15029 972 aaKnown RBP eCLIP17.68■□□□□ 0.425e-8■■■□□ 15.3
CLK2-202ENST00000361168 PLA2G4EQ3MJ16 856 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 CILP2Q8IUL8 1156 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 UHMK1Q8TAS1 419 aaKnown RBP17.68■□□□□ 0.42
CLK2-202ENST00000361168 GSDMBQ8TAX9 411 aa17.68■□□□□ 0.42
CLK2-202ENST00000361168 SGSM3Q96HU1 749 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms