RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CTNNB1P35222 781 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 SPAM1P38567 509 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 ACADVLP49748 655 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 FPGSQ05932 587 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 CCNIQ14094 377 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 DMC1Q14565 340 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 MYLK3Q32MK0 819 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PLPP4Q5VZY2 271 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 C22orf39Q6P5X5 142 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 FAM151BQ6UXP7 276 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 UBE2Q1Q7Z7E8 422 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 HPS6Q86YV9 775 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 CPNE9Q8IYJ1 553 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PCDH20Q8N6Y1 951 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 ZNF483Q8TF39 744 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 TWIST2Q8WVJ9 160 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 CPEB1Q9BZB8 566 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 SMG9Q9H0W8 520 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 WDR41Q9HAD4 459 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 MRPL40Q9NQ50 206 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 NMRK1Q9NWW6 199 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 CD274Q9NZQ7 290 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 TBC1D14Q9P2M4 693 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 PPIL1Q9Y3C6 166 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 RWDD3Q9Y3V2 267 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 DNAJC15Q9Y5T4 150 aa18.13■□□□□ 0.49
PDLIM7-203ENST00000359895 DOCK6Q96HP0 2047 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 BPTFQ12830 3046 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 GLYATL1P3A0A0U1RQE8 302 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 A0A0U1RQS6 177 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 LRRC14BA6NHZ5 514 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 GAPDHSO14556 408 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 MAP3K7O43318 606 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 CRCPO75575 148 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 CLDN7O95471 211 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 ENO3P13929 434 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 HOXA9P31269 272 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 CCR2P41597 374 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 RGS4P49798 205 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 NFATC2Q13469 925 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 TPRG1Q6ZUI0 275 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 ADAMTSL2Q86TH1 951 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 OR56A4Q8NGH8 313 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 NRG4Q8WWG1 115 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 NSUN5Q96P11 429 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 SLC25A23Q9BV35 468 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 SARS2Q9NP81 518 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 HCFC1R1Q9NWW0 138 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 PRKAG2Q9UGJ0 569 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 ZMYM5Q9UJ78 669 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 WASF2Q9Y6W5 498 aa18.12■□□□□ 0.49
PDLIM7-203ENST00000359895 PLXNB3Q9ULL4 1909 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 HIDE1A8MVS5 230 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 GIPC1O14908 333 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 POP4O95707 220 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 SNRPB2P08579 225 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 ACRV1P26436 265 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 HLA-FP30511 346 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 UBE3AQ05086 875 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 TEAD2Q15562 447 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 PPP1R3AQ16821 1122 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 FUT11Q495W5 492 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 AGKQ53H12 422 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 PIGGQ5H8A4 983 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 PSRC1Q6PGN9 363 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 CYHR1Q6ZMK1 362 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 GK5Q6ZS86 529 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 USP45Q70EL2 814 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 CCDC124Q96CT7 223 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 ECHDC3Q96DC8 303 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 ZNF641Q96N77 438 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 CDRT15Q96T59 188 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 SUV39H2Q9H5I1 410 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 IL26Q9NPH9 171 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 TLR9Q9NR96 1032 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 TDP1Q9NUW8 608 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 CRLS1Q9UJA2 301 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 PCTPQ9UKL6 214 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 ANKRD12Q6UB98 2062 aa18.11■□□□□ 0.49
PDLIM7-203ENST00000359895 CHEK2O96017 543 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 S100BP04271 92 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 HNRNPA1P09651 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 CD1EP15812 388 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 BPIP17213 487 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 GKP32189 559 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 CTSOP43234 321 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 CRY1Q16526 586 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 MMEL1Q495T6 779 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 CARD16Q5EG05 197 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 TCHHL1Q5QJ38 904 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 ZDHHC20Q5W0Z9 365 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 FRA10AC1Q70Z53 315 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 TMEM25Q86YD3 366 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 PHOSPHO2Q8TCD6 241 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 SLC26A7Q8TE54 656 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 POF1BQ8WVV4 589 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 SCRN2Q96FV2 425 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 RPL10LQ96L21 214 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 HTATIP2Q9BUP3 242 aa18.1■□□□□ 0.49
PDLIM7-203ENST00000359895 AKTIPQ9H8T0 292 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms