RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 GRM2Q14416 872 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 RFTN1Q14699 578 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 TAF1AQ15573 450 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PTPRNQ16849 979 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 GALNTL6Q49A17 601 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SETMARQ53H47 684 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 INO80DQ53TQ3 878 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 FAM78AQ5JUQ0 283 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PPP2R2DQ66LE6 453 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 RNF43Q68DV7 783 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NXNQ6DKJ4 435 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 C22orf39Q6P5X5 142 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PAQR3Q6TCH7 311 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CLNKQ7Z7G1 428 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ADIPOR2Q86V24 386 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 TREML1Q86YW5 311 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SLC7A5P1Q8MH63 180 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 SUN5Q8TC36 379 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 PPP4R1Q8TF05 950 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 STYXQ8WUJ0 223 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 GFM2Q969S9 779 aaKnown RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NXPE3Q969Y0 559 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ESAMQ96AP7 390 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 GRAMD1AQ96CP6 724 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ADGRE3Q9BY15 652 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 FAM192AQ9GZU8 254 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 POMKQ9H5K3 350 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 WDR55Q9H6Y2 383 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 THAP1Q9NVV9 213 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 NLE1Q9NVX2 485 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ACAD8Q9UKU7 415 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 MED16Q9Y2X0 877 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 ZNF711Q9Y462 761 aa5.06□□□□□ -1.6
ATXN3-202ENST00000359366 CCDC85CA6NKD9 419 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MEI4A8MW99 385 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 WASH3PC4AMC7 463 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 E9PBE3 544 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 C5orf67F2Z3F1 127 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 BOLA2-SMG1P6H3BVE0 249 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 TRAFD1O14545 582 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 KLF11O14901 512 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 SGTAO43765 313 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 FZD6O60353 706 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 KLHL41O60662 606 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 NDUFS3O75489 264 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 SRP72O76094 671 aaKnown RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 RHOBTB1O94844 696 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 PAPSS2O95340 614 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 SIX3O95343 332 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 LATS1O95835 1130 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CYP17A1P05093 508 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 KRT16P08779 473 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CD97P48960 835 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CDH13P55290 713 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MXRA7P84157 204 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 ECT2LQ008S8 904 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 POU4F1Q01851 419 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 ACVR1Q04771 509 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 BNIP1Q12981 228 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 OR4D1Q15615 310 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 INSCQ1MX18 579 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 SLC9B1Q4ZJI4 515 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 ARL13AQ5H913 290 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CTSL3PQ5NE16 218 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MRNIPQ6NTE8 343 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 C11orf96Q7Z7L8 435 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 GPR65Q8IYL9 337 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CPXM2Q8N436 756 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 POU5F2Q8N7G0 328 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 SNX31Q8N9S9 440 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 OR2AP1Q8NGE2 309 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CALML6Q8TD86 181 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 LPGAT1Q92604 370 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 FGF13Q92913 245 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 C7orf26Q96N11 449 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 TSNARE1Q96NA8 513 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 GPR21Q99679 349 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CCT7Q99832 543 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MTIF3Q9H2K0 278 aaKnown RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 PARVBQ9HBI1 364 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 OXSMQ9NWU1 459 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 DUS2Q9NX74 493 aaKnown RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 NSMCE4AQ9NXX6 385 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 FAM8A1Q9UBU6 413 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 ZDHHC2Q9UIJ5 367 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MBD1Q9UIS9 605 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MKL2Q9ULH7 1088 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 PRSS21Q9Y6M0 314 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 A0A0J9YYE9 177 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 HTR3EA5X5Y0 456 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 KRT87PA6NCN2 255 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 NPEPPSL1A6NEC2 478 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 TARM1B6A8C7 271 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 UBXN8O00124 270 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 CDC7O00311 574 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 GAPDHSO14556 408 aaPredicted RBP5.05□□□□□ -1.6
ATXN3-202ENST00000359366 TRIM13O60858 407 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 MTX2O75431 263 aa5.05□□□□□ -1.6
ATXN3-202ENST00000359366 PRAMEF1O95521 474 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms