RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RAB7BQ96AH8 199 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 GABRG3Q99928 467 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 HDAC8Q9BY41 377 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 GPAMQ9HCL2 828 aa13.74□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM208BQ5VWN6 2430 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 FANCMQ8IYD8 2048 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ANTXRLA6NF34 631 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 PRMT5O14744 637 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 AREL1O15033 823 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 BIRC5O15392 142 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 VPS26AO75436 327 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 KLHL2O95198 593 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ADRB1P08588 477 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 C5AR1P21730 350 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 RPS3P23396 243 aaKnown RBP eCLIP13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ACRV1P26436 265 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 FMO4P31512 558 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 SLC26A3P40879 764 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 METAP1P53582 386 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 CDKN2DP55273 166 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 SATB1Q01826 763 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 CCDC15Q0P6D6 951 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 CCINQ13939 588 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 LRRC32Q14392 662 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF460Q14592 562 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ACOX1Q15067 660 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF284Q2VY69 593 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 C16orf46Q6P387 395 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 KLC3Q6P597 504 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 NRSN1Q8IZ57 195 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 PLD6Q8N2A8 252 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 NXPE1Q8N323 547 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 PNPLA1Q8N8W4 532 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 IL17RCQ8NAC3 791 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 OR2T3Q8NH03 318 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 KCTD4Q8WVF5 259 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 SCYL1Q96KG9 808 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF317Q96PQ6 595 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 CLPBQ9H078 707 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM83DQ9H4H8 585 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 TAS2R13Q9NYV9 303 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 TMEM216Q9P0N5 145 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 EMCNQ9ULC0 261 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 CA14Q9ULX7 337 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
PDLIM5-203ENST00000359265 WDR91A4D1P6 747 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 AGAP14A8MT82 685 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 TCP11X1B4DZS4 312 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 H3BMM5 538 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 NEMP1O14524 444 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 GPR39O43194 453 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 SPINT1O43278 529 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 WISP3O95389 354 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM107AO95990 144 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 HOXB2P14652 356 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 TAC1P20366 129 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 CD9P21926 228 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 GMPRP36959 345 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 SEC24CP53992 1094 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 IRX4P78413 519 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 CNTN1Q12860 1018 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 FAM83EQ2M2I3 478 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 TMEM52BQ4KMG9 183 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 EOGTQ5NDL2 527 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 LRRC8EQ6NSJ5 796 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 UGT3A1Q6NUS8 523 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 RFLNAQ6ZTI6 216 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 Q6ZVL8 140 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 CENPLQ8N0S6 344 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 SYNPOQ8N3V7 929 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 TRAM1L1Q8N609 369 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 RAB3IL1Q8TBN0 382 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 RDH11Q8TC12 318 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 NELL2Q99435 816 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 ZSCAN5AQ9BUG6 496 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 WRAP53Q9BUR4 548 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 SPATA16Q9BXB7 569 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 P2RY12Q9H244 342 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 NMRAL1Q9HBL8 299 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 SYTL2Q9HCH5 934 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 SMOXQ9NWM0 555 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 ZDHHC3Q9NYG2 299 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 GNPTGQ9UJJ9 305 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 NDRG2Q9UN36 371 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 TRPM6Q9BX84 2022 aa13.72□□□□□ -0.21
PDLIM5-203ENST00000359265 GPR179Q6PRD1 2367 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 E5RI56 91 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 PLK4O00444 970 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 WNT9AO14904 365 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 MID1O15344 667 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 OR1I1O60431 355 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 BPGMP07738 259 aa13.71□□□□□ -0.21
PDLIM5-203ENST00000359265 ZNF37AP17032 561 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms