RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 FOLH1Q04609 750 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 FASTKQ14296 549 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 LIN52Q52LA3 116 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 ADGRF1Q5T601 910 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RNF219Q5W0B1 726 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 CCDC149Q6ZUS6 474 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 TICAM1Q8IUC6 712 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RYBPQ8N488 228 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 BHLHE22Q8NFJ8 381 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 MDGA1Q8NFP4 955 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 ZNF483Q8TF39 744 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 SMG7Q92540 1137 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 EXT2Q93063 718 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 WBP2Q969T9 261 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 DDX50Q9BQ39 737 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 SLC25A23Q9BV35 468 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 ERVK-6Q9BXR3 956 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 TFB2MQ9H5Q4 396 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 PAPOLBQ9NRJ5 636 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 POLR3BQ9NW08 1133 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 TRAF6Q9Y4K3 522 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 H0YJX3 145 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 GPC4O75487 556 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RHOBTB1O94844 696 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 PRLP01236 227 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 F11P03951 625 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 HOXA9P31269 272 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 DPP6P42658 865 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 SH3BGRP55822 239 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 ROR2Q01974 943 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 OR4D1Q15615 310 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 TAF12Q16514 161 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 IRAK1BP1Q5VVH5 260 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 CXorf57Q6NSI4 855 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 UGT2A3Q6UWM9 527 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 GK5Q6ZS86 529 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RAB44Q7Z6P3 723 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 MFN1Q8IWA4 741 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 PTGR2Q8N8N7 351 aaPredicted RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 LPCAT1Q8NF37 534 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 OR4K2Q8NGD2 314 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RHEBL1Q8TAI7 183 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 LPGAT1Q92604 370 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 TRMT2BQ96GJ1 504 aaKnown RBP14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 NPAS2Q99743 824 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RNF38Q9H0F5 515 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 MUC3BQ9H195 1237 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 EPB41L1Q9H4G0 881 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 HCFC1R1Q9NWW0 138 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 PCDHGA7Q9Y5G6 932 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 RAI2Q9Y5P3 530 aa14.19□□□□□ -0.14
NIPAL3-203ENST00000358028 UBA6A0AVT1 1052 aaPredicted RBP14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 CCDC189A1A4V9 331 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 C2orf78A6NCI8 922 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 C2orf81A6NN90 581 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 C8BP07358 591 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 SNRPB2P08579 225 aaKnown RBP14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 HNRNPA1P09651 372 aaKnown RBP eCLIP14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 FMO4P31512 558 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 MS4A2Q01362 244 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 TWF1Q12792 350 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 LRP8Q14114 963 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 TRIM25Q14258 630 aaKnown RBP14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 TMA16Q96EY4 203 aaKnown RBP14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 DUS3LQ96G46 650 aaKnown RBP14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 RIPOR3Q96MK2 946 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 TCF12Q99081 682 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 PIDD1Q9HB75 910 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 SYTL2Q9HCH5 934 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 CACNA2D2Q9NY47 1150 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 PACSIN3Q9UKS6 424 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 FAM50BQ9Y247 325 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 ANAPC1Q9H1A4 1944 aa14.18□□□□□ -0.14
NIPAL3-203ENST00000358028 SMIM31A0A1B0GVY4 71 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 CAPN8A6NHC0 703 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ENO4A6NNW6 628 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 BBIP1A8MTZ0 92 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 H3BMM5 538 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 UBXN8O00124 270 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 TRIM24O15164 1050 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 MAP3K13O43283 966 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 NDUFS3O75489 264 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 LRG1P02750 347 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 FGF4P08620 206 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 PABPC4LP0CB38 370 aaKnown RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ARSAP15289 507 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 TSPAN8P19075 237 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 LPOP22079 712 aaPredicted RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 MTHFRP42898 656 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 NAA20P61599 178 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 NTHL1P78549 312 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ARF5P84085 180 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 PPP1R3AQ16821 1122 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 AGKQ53H12 422 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 ATAT1Q5SQI0 421 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 REP15Q6BDI9 236 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 CLEC6AQ6EIG7 209 aa14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 GRASPQ7Z6J2 395 aaPredicted RBP14.17□□□□□ -0.14
NIPAL3-203ENST00000358028 CLYBLQ8N0X4 340 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms