RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 CRTC1Q6UUV9 634 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 Q6ZS52 159 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 CREG2Q8IUH2 290 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 NPWQ8N729 165 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 FAM46DQ8NEK8 389 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 ATXN7L3BQ96GX2 97 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 SERPINB12Q96P63 405 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 DNAJC16Q9Y2G8 782 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 PSMD12O00232 456 aaPredicted RBP9.11□□□□□ -0.95
UPF2-202ENST00000357604 PRKCGP05129 697 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 TPBGLP0DKB5 382 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 SPINT3P49223 89 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 DCDC1P59894 354 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 RPA4Q13156 261 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 CNGA3Q16281 694 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 HP1BP3Q5SSJ5 553 aaPredicted RBP9.11□□□□□ -0.95
UPF2-202ENST00000357604 OTUD1Q5VV17 481 aaPredicted RBP9.11□□□□□ -0.95
UPF2-202ENST00000357604 NIPAL1Q6NVV3 410 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 ADAMTSL2Q86TH1 951 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 GPR135Q8IZ08 494 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 UHMK1Q8TAS1 419 aaKnown RBP9.11□□□□□ -0.95
UPF2-202ENST00000357604 DTNBP1Q96EV8 351 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 ABCG8Q9H221 673 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 ACOT9Q9Y305 439 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 TSPAN11A1L157 253 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 TXNDC9O14530 226 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 DYNC1I1O14576 645 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 TNFRSF10CO14798 259 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 FLRT2O43155 660 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 PKMP14618 531 aaKnown RBP9.11□□□□□ -0.95
UPF2-202ENST00000357604 VAV1P15498 845 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 DNAJC3Q13217 504 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 CHRNA6Q15825 494 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 BROXQ5VW32 411 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 C12orf66Q96MD2 445 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 TIMM29Q9BSF4 260 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 GRID1Q9ULK0 1009 aa9.11□□□□□ -0.95
UPF2-202ENST00000357604 SMAD6O43541 496 aaKnown RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 PAK4O96013 591 aaPredicted RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 SERPIND1P05546 499 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ABHD2P08910 425 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ACP5P13686 325 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TNFRSF8P28908 595 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 GKP32189 559 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 MPLP40238 635 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 RPL21P46778 160 aaKnown RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 STX1BP61266 288 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 CERCAMQ5T4B2 595 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 FAM76AQ8TAV0 307 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 NETO1Q8TDF5 533 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 RTP4Q96DX8 246 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ZBTB18Q99592 522 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ANLNQ9NQW6 1124 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 CRYL1Q9Y2S2 319 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 KIR2DS5A0A0G2JLQ3 304 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 A0A0G2JNG1 304 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 A0A1W2PPC4 97 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 EIF4E1BA6NMX2 242 aaKnown RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 KIR2DS3K7RE56 304 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ZMPSTE24O75844 475 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 EPN2O95208 641 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TROVE2P10155 538 aaKnown RBP eCLIP9.1□□□□□ -0.95
UPF2-202ENST00000357604 KIR2DS5Q14953 304 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 PTPRNQ16849 979 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 HSP90AA5PQ58FG0 334 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TXNDC11Q6PKC3 985 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 CFAP206Q8IYR0 622 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 C7orf57Q8NEG2 295 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 RLN3Q8WXF3 142 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 DNAJC1Q96KC8 554 aaKnown RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 MRGPRX2Q96LB1 330 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TMEM74Q96NL1 305 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 LENG8Q96PV6 779 aaPredicted RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 GFM1Q96RP9 751 aaKnown RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.1□□□□□ -0.95
UPF2-202ENST00000357604 V9GYY5 206 aaPredicted RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 MT-CO1P00395 513 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ACRV1P26436 265 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TEAD1P28347 426 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 MAPK1P28482 360 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 PLEKHS1Q5SXH7 462 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TRNP1Q6NT89 227 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 HIBCHQ6NVY1 386 aaPredicted RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 MED8Q96G25 268 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 TMEM245Q9H330 911 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 PLAAQ9Y263 795 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 CCDC189A1A4V9 331 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 KRBA1A5PL33 1030 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 ISM1B1AKI9 464 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 LRP3O75074 770 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 GPR156Q8NFN8 814 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 WFDC5Q8TCV5 224 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 GGT7Q9UJ14 662 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 R3HDM2Q9Y2K5 976 aaKnown RBP9.1□□□□□ -0.95
UPF2-202ENST00000357604 WASF2Q9Y6W5 498 aa9.1□□□□□ -0.95
UPF2-202ENST00000357604 MYO16Q9Y6X6 1858 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 IGHV1OR15-9A0A0B4J2B8 117 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 AQP9O43315 295 aa9.09□□□□□ -0.95
UPF2-202ENST00000357604 CDH16O75309 829 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms