RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SH3BP4Q9P0V3 963 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SIRPGQ9P1W8 387 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 ATP6V1HQ9UI12 483 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 OGDHLQ9ULD0 1010 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 GPR32O75388 356 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PSIP1O75475 530 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 WARSP23381 471 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 HALP42357 657 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 RPS9P46781 194 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SLC18A1P54219 525 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PLD1Q13393 1074 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 TNFAIP8L3Q5GJ75 292 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SLC22A9Q8IVM8 553 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 OR4K2Q8NGD2 314 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SH3KBP1Q96B97 665 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 MTMR10Q9NXD2 777 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SMPD3Q9NY59 655 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 IGSF9Q9P2J2 1179 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 TRAF6Q9Y4K3 522 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PCDHB12Q9Y5F1 795 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 MICAL3Q7RTP6 2002 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 ITGB1P05556 798 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 RGS4P49798 205 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 CYP4F8P98187 520 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 TLR1Q15399 786 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 EFL1Q7Z2Z2 1120 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PIWIL4Q7Z3Z4 852 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 OR2T34Q8NGX1 318 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 OR2T3Q8NH03 318 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 S100ZQ8WXG8 99 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 HGH1Q9BTY7 390 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 NFKBIZQ9BYH8 718 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 TAS2R13Q9NYV9 303 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SPATA7Q9P0W8 599 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 RCOR3Q9P2K3 495 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 GIT1Q9Y2X7 761 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PCDHB9Q9Y5E1 797 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 TLL2Q9Y6L7 1015 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 AURKAO14965 403 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 DLX3O60479 287 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 MTHFD1P11586 935 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 GNAZP19086 355 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PHC1P78364 1004 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 ECT2LQ008S8 904 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SQLEQ14534 574 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SYT16Q17RD7 645 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 AP5B1Q2VPB7 878 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 HECTD2Q5U5R9 776 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 ADCK2Q7Z695 626 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SLC7A5P1Q8MH63 180 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 VPS37AQ8NEZ2 397 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 MRPL57Q9BQC6 102 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PRKD2Q9BZL6 878 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 OAZ3Q9UMX2 235 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PCDHGA3Q9Y5H0 932 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 CCDC182A6NF36 153 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 K7EPI3 171 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 PGLSO95336 258 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ENO2P09104 434 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-202ENST00000355815 GLUD2P49448 558 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 PRKAA2P54646 552 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 CDK18Q07002 472 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 IL18R1Q13478 541 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 TP53BP2Q13625 1128 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 SMU1Q2TAY7 513 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 AHSA2Q719I0 299 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ZNF605Q86T29 641 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 CHCHD6Q9BRQ6 235 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 VRTNQ9H8Y1 702 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ADAM28Q9UKQ2 775 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 COPG1Q9Y678 874 aaKnown RBP13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ARL5AQ9Y689 179 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 NOBOXO60393 691 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 CNPP09543 421 aaKnown RBP13.97□□□□□ -0.17
SREBF1-202ENST00000355815 OR1D2P34982 312 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 RPS24P62847 133 aaKnown RBP13.97□□□□□ -0.17
SREBF1-202ENST00000355815 SDE2Q6IQ49 451 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 MON1AQ86VX9 555 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ADHFE1Q8IWW8 467 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 C3orf58Q8NDZ4 430 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 MAPK15Q8TD08 544 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 KCNK13Q9HB14 408 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 GKN1Q9NS71 199 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 KANSL3Q9P2N6 904 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ZNF222Q9UK12 451 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 A0A0U1RQS6 177 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-202ENST00000355815 ALOX5P09917 674 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 AQP1P29972 269 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 GGT5P36269 586 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 FGD3Q5JSP0 725 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 RNF219Q5W0B1 726 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-202ENST00000355815 NRG4Q8WWG1 115 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 TOP1MTQ969P6 601 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 HERC2P3Q9BVR0 1158 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 KLHL1Q9NR64 748 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 CATSPERZQ9NTU4 200 aa13.97□□□□□ -0.17
SREBF1-202ENST00000355815 TRPM5Q9NZQ8 1165 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms