RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PDFQ9HBH1 243 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 SLCO1B3Q9NPD5 702 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 ABCF3Q9NUQ8 709 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 PIH1D1Q9NWS0 290 aaKnown RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 TRPM5Q9NZQ8 1165 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 USP36Q9P275 1121 aaKnown RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 UXTQ9UBK9 157 aaPredicted RBP8.21□□□□□ -1.1
CD44-205ENST00000352818 PSAT1Q9Y617 370 aa8.21□□□□□ -1.1
CD44-205ENST00000352818 A0A1B0GTQ1 180 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 HEATR9A2RTY3 570 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 ANKRD65E5RJM6 399 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 ATP9BO43861 1147 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 PLIN3O60664 434 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 DNAJC6O75061 913 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 SNNO75324 88 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 CLDN11O75508 207 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 ATP5HO75947 161 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 UBOX5O94941 541 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 TBX18O95935 607 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 MT-CYBP00156 380 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 GSRP00390 522 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 TCF3P15923 654 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 BGNP21810 368 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 NMBRP28336 390 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 EIF2DP41214 584 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 ARCN1P48444 511 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 LSSP48449 732 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 HARS2P49590 506 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 WNT3AP56704 352 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 PDE1BQ01064 536 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 OCRLQ01968 901 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 SRSF6Q13247 344 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 LAMB3Q13751 1172 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 PDE1CQ14123 709 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 RFTN1Q14699 578 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 CLCA4Q14CN2 919 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 SETDB1Q15047 1291 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 FAM133BQ5BKY9 247 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 RABGAP1LQ5R372 815 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 CES3Q6UWW8 571 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 XKR5Q6UX68 686 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 ZNF783Q6ZMS7 281 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 CCDC81Q6ZN84 652 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 KIAA0408Q6ZU52 694 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 NLRP9Q7RTR0 991 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 STRA8Q7Z7C7 330 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 CLEC14AQ86T13 490 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 PTRH1Q86Y79 214 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 ETFBKMTQ8IXQ9 262 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 C10orf67Q8IYJ2 551 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 IPMKQ8NFU5 416 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 GABPB2Q8TAK5 448 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 ARRDC2Q8TBH0 407 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 PTPRN2Q92932 1015 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 GPR22Q99680 433 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 DDX50Q9BQ39 737 aaKnown RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 ORAI3Q9BRQ5 295 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 TRIM55Q9BYV6 548 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 RHOJQ9H4E5 214 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 CHRAC1Q9NRG0 131 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 SNX15Q9NRS6 342 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 TREX1Q9NSU2 369 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 C20orf96Q9NUD7 363 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.2□□□□□ -1.1
CD44-205ENST00000352818 MID2Q9UJV3 735 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 STOML2Q9UJZ1 356 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 EMCNQ9ULC0 261 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 RIMKLBQ9ULI2 386 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 MED13Q9UHV7 2174 aa8.2□□□□□ -1.1
CD44-205ENST00000352818 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 LOC285095A0A1B0GVY8 99 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 ILVBLA1L0T0 632 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 PMS2P1A4D2B8 440 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 C2orf78A6NCI8 922 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 WIPF3A6NGB9 483 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 J3KR12 359 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 COCHO43405 550 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 HNRNPCL1O60812 293 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 H2AFYO75367 372 aaKnown RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 STC2O76061 302 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 OLFM2O95897 454 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MT-CO3P00414 261 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 EPOP01588 193 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 PROCP04070 461 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 PRKCGP05129 697 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 FGF1P05230 155 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 APOA4P06727 396 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 MMP2P08253 660 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 HMBSP08397 361 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 COL6A2P12110 1019 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 HLA-DPA1P20036 260 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 CES1P23141 567 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 GRK2P25098 689 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
CD44-205ENST00000352818 OR1E1P30953 314 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 NTSR1P30989 418 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 ETFBP38117 255 aa8.19□□□□□ -1.1
CD44-205ENST00000352818 AFF3P51826 1226 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms