RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CDK5R2Q13319 367 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 SYT16Q17RD7 645 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 PIWIL4Q7Z3Z4 852 aaKnown RBP13.16□□□□□ -0.3
IFT88-202ENST00000351808 CUZD1Q86UP6 607 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 SLC41A1Q8IVJ1 513 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.3
IFT88-202ENST00000351808 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 MCRS1Q96EZ8 462 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TOE1Q96GM8 510 aaKnown RBP13.16□□□□□ -0.3
IFT88-202ENST00000351808 CCDC17Q96LX7 622 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 C3orf30Q96M34 536 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 SPATA13Q96N96 652 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 LRRC4Q9HBW1 653 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 CITO14578 2027 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 ZCWPW2A0A1B0GU75 182 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 OR6C70A6NIJ9 312 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 BBIP1A8MTZ0 92 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 H3BQ06 376 aaPredicted RBP13.16□□□□□ -0.3
IFT88-202ENST00000351808 SLC9A3R1O14745 358 aaPredicted RBP13.16□□□□□ -0.3
IFT88-202ENST00000351808 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
IFT88-202ENST00000351808 ANGPTL1O95841 491 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 MT-ND2P03891 347 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
IFT88-202ENST00000351808 COL6A1P12109 1028 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TM4SF1P30408 202 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 MTHFRP42898 656 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 DSTNP60981 165 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 CYHR1Q6ZMK1 362 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 RIMKLAQ8IXN7 391 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 SEPT10Q9P0V9 454 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TMPRSS11EQ9UL52 423 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TBC1D24Q9ULP9 559 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 ANKRD6Q9Y2G4 727 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 GRIP1Q9Y3R0 1128 aa13.16□□□□□ -0.3
IFT88-202ENST00000351808 TSPAN4O14817 238 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 LYPLA2O95372 231 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 HRH2P25021 359 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 IL12RB1P42701 662 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 SLC15A1P46059 708 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 RAP1GAPP47736 663 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 PLK1P53350 603 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 MAPK12P53778 367 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 PRKCDQ05655 676 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 GPAT3Q53EU6 434 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 LARP4Q71RC2 724 aaKnown RBP eCLIP13.15□□□□□ -0.3
IFT88-202ENST00000351808 KCNMB4Q86W47 210 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 OR8H2Q8N162 312 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
IFT88-202ENST00000351808 PYCR2Q96C36 320 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 QKIQ96PU8 341 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■■ 38.1
IFT88-202ENST00000351808 FERD3LQ96RJ6 166 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 CDADC1Q9BWV3 514 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 NIF3L1Q9GZT8 377 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 SPON1Q9HCB6 807 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 GLTPQ9NZD2 209 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 CFL2Q9Y281 166 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 A0A0U1RQS6 177 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 C2CD4BA6NLJ0 364 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 DSCR3O14972 297 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 CNTN5O94779 1100 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 PDGFAP04085 211 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 LCKP06239 509 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 CYP3A5P20815 502 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 PRKACGP22612 351 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 SLC26A3P40879 764 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 ZNF470Q6ECI4 717 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 DENND5AQ6IQ26 1287 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 DPH6Q7L8W6 267 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 CACTIN-AS1Q8N1I8 211 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 FRS2Q8WU20 508 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 SDHCQ99643 169 aaPredicted RBP13.15□□□□□ -0.3
IFT88-202ENST00000351808 TEX13BQ9BXU2 312 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 LHX5Q9H2C1 402 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 KCNN2Q9H2S1 579 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 TMEM39AQ9NV64 488 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 ATPIF1Q9UII2 106 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 STAP1Q9ULZ2 295 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 ACOT9Q9Y305 439 aa13.15□□□□□ -0.3
IFT88-202ENST00000351808 GDF11O95390 407 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 POU3F3P20264 500 aaPredicted RBP13.14□□□□□ -0.31
IFT88-202ENST00000351808 KCNA5P22460 613 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 TGFBR2P37173 567 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 NFIAQ12857 509 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 LAPTM5Q13571 262 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 EFR3AQ14156 821 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 OR6B2Q6IFH4 312 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 BNIPLQ7Z465 357 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 PTRH1Q86Y79 214 aaKnown RBP13.14□□□□□ -0.31
IFT88-202ENST00000351808 RIOX2Q8IUF8 465 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 GPR78Q96P69 363 aa13.14□□□□□ -0.31
IFT88-202ENST00000351808 GPR22Q99680 433 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms