RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 BTBD8Q5XKL5 378 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 PRR23BQ6ZRT6 265 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 STK32CQ86UX6 486 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 LILRB4Q8NHJ6 448 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 SPATA22Q8NHS9 363 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 OSCP1Q8WVF1 389 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 KCTD13Q8WZ19 329 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 TMEM74Q96NL1 305 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 TOR3AQ9H497 397 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 GSTO2Q9H4Y5 243 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 SLCO3A1Q9UIG8 710 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 FBXW11Q9UKB1 542 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 DSEQ9UL01 958 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 PCDHGA3Q9Y5H0 932 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 SHROOM3Q8TF72 1996 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 NDUFS2O75306 463 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 ALPLP05186 524 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 SLC1A2P43004 574 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 VBP1P61758 197 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 CDH17Q12864 832 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 CATSPEREQ5SY80 951 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 TWF2Q6IBS0 349 aaKnown RBP18.53■□□□□ 0.56
SCARF1-202ENST00000348987 ESRP1Q6NXG1 681 aaKnown RBP18.53■□□□□ 0.56
SCARF1-202ENST00000348987 ARHGAP36Q6ZRI8 547 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 ADCK1Q86TW2 530 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 LGI2Q8N0V4 545 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 MIER2Q8N344 545 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 TOP6BLQ8N6T0 577 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 CHDHQ8NE62 594 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-202ENST00000348987 OR6Q1Q8NGQ2 317 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 HDAC2Q92769 488 aaKnown RBP18.53■□□□□ 0.56
SCARF1-202ENST00000348987 SDCCAG3Q96C92 435 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 KIFC1Q9BW19 673 aa18.53■□□□□ 0.56
SCARF1-202ENST00000348987 H3BMM5 538 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 EIF3FO00303 357 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-202ENST00000348987 GABRDO14764 452 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 MZF1P28698 734 aaPredicted RBP18.52■□□□□ 0.56
SCARF1-202ENST00000348987 CDH13P55290 713 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 DAG1Q14118 895 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 CTU2Q2VPK5 515 aaKnown RBP18.52■□□□□ 0.56
SCARF1-202ENST00000348987 C3orf58Q8NDZ4 430 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 PIK3C3Q8NEB9 887 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 TMBIM1Q969X1 311 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 VPS33AQ96AX1 596 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 CLIP3Q96DZ5 547 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 COLEC11Q9BWP8 271 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 FBXO8Q9NRD0 319 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 OR12D3Q9UGF7 316 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 SNX5Q9Y5X3 404 aa18.52■□□□□ 0.56
SCARF1-202ENST00000348987 ILVBLA1L0T0 632 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 SNPHO15079 494 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 LRIG2O94898 1065 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 ILF2Q12905 390 aaKnown RBP18.52■□□□□ 0.55
SCARF1-202ENST00000348987 HIST2H2ACQ16777 129 aaPredicted RBP18.52■□□□□ 0.55
SCARF1-202ENST00000348987 DGUOKQ16854 277 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 RBM20Q5T481 1227 aaKnown RBP18.52■□□□□ 0.55
SCARF1-202ENST00000348987 ZNF467Q7Z7K2 595 aaPredicted RBP18.52■□□□□ 0.55
SCARF1-202ENST00000348987 PNPLA1Q8N8W4 532 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 TXNDC15Q96J42 360 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 PAAF1Q9BRP4 392 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 TKTL2Q9H0I9 626 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 TRIT1Q9H3H1 467 aaKnown RBP18.52■□□□□ 0.55
SCARF1-202ENST00000348987 SPC25Q9HBM1 224 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 ABCB10Q9NRK6 738 aa18.52■□□□□ 0.55
SCARF1-202ENST00000348987 A0A087X1B8 175 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 ERI2A8K979 691 aaKnown RBP18.51■□□□□ 0.55
SCARF1-202ENST00000348987 UPK1AO00322 258 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 MT-CYBP00156 380 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-202ENST00000348987 MYL3P08590 195 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 UMPSP11172 480 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 FSHRP23945 695 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 KPNA2P52292 529 aaKnown RBP18.51■□□□□ 0.55
SCARF1-202ENST00000348987 NFYCQ13952 458 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 GRB14Q14449 540 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 CALML6Q8TD86 181 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 SENP8Q96LD8 212 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 SLAMF8Q9P0V8 285 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 SLC2A6Q9UGQ3 507 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 DNAJC15Q9Y5T4 150 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 OAS3Q9Y6K5 1087 aaKnown RBP18.51■□□□□ 0.55
SCARF1-202ENST00000348987 TSC2P49815 1807 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 NOTOA8MTQ0 251 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 PPP6CO00743 305 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 ASNA1O43681 348 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 PCMT1P22061 227 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 ARNTP27540 789 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 CASP2P42575 452 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 GPR162Q16538 588 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 TAS2R42Q7RTR8 314 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 BHLHA9Q7RTU4 235 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 PLEKHH3Q7Z736 793 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 PTRH1Q86Y79 214 aaKnown RBP18.51■□□□□ 0.55
SCARF1-202ENST00000348987 CCDC126Q96EE4 140 aa18.51■□□□□ 0.55
SCARF1-202ENST00000348987 PAK1IP1Q9NWT1 392 aaPredicted RBP18.51■□□□□ 0.55
SCARF1-202ENST00000348987 ANKRD12Q6UB98 2062 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 DYTNA2CJ06 578 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 CD40LGP29965 261 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 PIGAP37287 484 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 COPZ1P61923 177 aa18.5■□□□□ 0.55
SCARF1-202ENST00000348987 MFSD10Q14728 455 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms