RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 PDLIM5Q96HC4 596 aaKnown RBP10.88□□□□□ -0.67
ECM1-201ENST00000346569 GPR21Q99679 349 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 PITPNM3Q9BZ71 974 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 DYRK4Q9NR20 520 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 FGFR1OP2Q9NVK5 253 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 SMOXQ9NWM0 555 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 THEGQ9P2T0 379 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 CD84Q9UIB8 345 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 CRLS1Q9UJA2 301 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 FAM50BQ9Y247 325 aa10.88□□□□□ -0.67
ECM1-201ENST00000346569 ZNF106Q9H2Y7 1883 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 IQCF5A8MTL0 148 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 H3BMM5 538 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 WNT9AO14904 365 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 DLX3O60479 287 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 SNX3O60493 162 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 SYNCRIPO60506 623 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 MMP20O60882 483 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 RNASEH1O60930 286 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 NIPSNAP2O75323 286 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 SNNO75324 88 aaPredicted RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 VPS26AO75436 327 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 TSPAN12O95859 305 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 ADH1BP00325 375 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 PYGLP06737 847 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 RBP1P09455 135 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 ELFN1P0C7U0 828 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 SRFP11831 508 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CD1DP15813 335 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 NSG1P42857 185 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 PSMD8P48556 350 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 TAS2R38P59533 333 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 OCRLQ01968 901 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 BST1Q10588 318 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 PDAP1Q13442 181 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 TDGQ13569 410 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CCINQ13939 588 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CHI3L2Q15782 390 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 FBXO43Q4G163 708 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 ATG16L1Q676U5 607 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 SDE2Q6IQ49 451 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 PTCRAQ6ISU1 281 aaPredicted RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 ZYG11AQ6WRX3 759 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 ATG14Q6ZNE5 492 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 OTOAQ7RTW8 1153 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 NKAPQ8N5F7 415 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 CLDN19Q8N6F1 224 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CCDC63Q8NA47 563 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 GIMAP7Q8NHV1 300 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CD200R1Q8TD46 325 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 BTN2A2Q8WVV5 523 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 GRAMD1AQ96CP6 724 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 DTD2Q96FN9 168 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 TSNARE1Q96NA8 513 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 VPS35Q96QK1 796 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 COPS8Q99627 209 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 ELAC2Q9BQ52 826 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 ZSCAN5AQ9BUG6 496 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 RIOK2Q9BVS4 552 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 SPATA16Q9BXB7 569 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 C20orf27Q9GZN8 174 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 DERL2Q9GZP9 239 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 MKRN2Q9H000 416 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 CLPBQ9H078 707 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 MRPL46Q9H2W6 279 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 FBRSQ9HAH7 460 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 OXSMQ9NWU1 459 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CPSF2Q9P2I0 782 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 KLHL42Q9P2K6 505 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 MID2Q9UJV3 735 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 CNOT6Q9ULM6 557 aaKnown RBP10.87□□□□□ -0.67
ECM1-201ENST00000346569 CKAP5Q14008 2032 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 NCOR1O75376 2440 aa10.87□□□□□ -0.67
ECM1-201ENST00000346569 FADS2P1A8MWK0 482 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 TK2O00142 265 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 SGTAO43765 313 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 ZBTB14O43829 449 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 TRIM13O60858 407 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 RECQL5O94762 991 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 KLF8O95600 359 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 RALBP11234 206 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 TFEBP19484 476 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 CHRM3P20309 590 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 COL9A1P20849 921 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 GLRBP48167 497 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 KPNA2P52292 529 aaKnown RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 DPTQ07507 201 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 STX3Q13277 289 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 ACOX1Q15067 660 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 AGERQ15109 404 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 PUS10Q3MIT2 529 aaKnown RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 HSF5Q4G112 596 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 GPRC6AQ5T6X5 926 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 AGBL4Q5VU57 503 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 ZNF776Q68DI1 518 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 UGT3A1Q6NUS8 523 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 FAM47EQ6ZV65 393 aa10.86□□□□□ -0.67
ECM1-201ENST00000346569 TRMT11Q7Z4G4 463 aaKnown RBP10.86□□□□□ -0.67
ECM1-201ENST00000346569 ZNF687Q8N1G0 1237 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms