RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 POLR3BQ9NW08 1133 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 GDE1Q9NZC3 331 aa16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-201ENST00000344626 A0A1W2PP55 124 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 IPO13O94829 963 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 TNFP01375 233 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 PTPN4P29074 926 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 HSD17B2P37059 387 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 SSR2P43308 183 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 CYTH1Q15438 398 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 ANXA8L1Q5VT79 327 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 LHX8Q68G74 356 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 ZNF544Q6NX49 715 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 CYP4Z2PQ8N1L4 340 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 SORCS1Q8WY21 1168 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 MRPL38Q96DV4 380 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 PWWP2AQ96N64 755 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 TRIM43BA6NCK2 446 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 STK16O75716 305 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 SHBGP04278 402 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 PRKAG1P54619 331 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 TRIM43Q96BQ3 446 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 UGT2B28Q9BY64 529 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 LRRC4CQ9HCJ2 640 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 PIAS1O75925 651 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 CDH5P33151 784 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 FBXO43Q4G163 708 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 NCBP2-AS2Q69YL0 99 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 MRTO4Q9UKD2 239 aaKnown RBP16.27■□□□□ 0.2
SMARCA4-201ENST00000344626 LATS1O95835 1130 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 ATP6V1B2P21281 511 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 CXCL12P48061 93 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 RPL38P63173 70 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 SLC10A7Q0GE19 358 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 SEMA5AQ13591 1074 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 KIAA0930Q6ICG6 404 aaPredicted RBP16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 LDB1Q86U70 411 aaPredicted RBP16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 DEFB107AQ8IZN7 70 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 SRMSQ9H3Y6 488 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 IQCF5A8MTL0 148 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 UPK3BL1B0FP48 263 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 UPK3BL2E5RIL1 263 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 NTSR1P30989 418 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 RPS7P62081 194 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 C22orf39Q6P5X5 142 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 METTL21AQ8WXB1 218 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 C12orf66Q96MD2 445 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 OLFM3Q96PB7 478 aa16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 AARSD1Q9BTE6 412 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-201ENST00000344626 SCN9AQ15858 1988 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CNTN5O94779 1100 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CYP11A1P05108 521 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 C2P06681 752 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 PFKLP17858 780 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 PROZP22891 400 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 SAMD4BQ5PRF9 694 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 APTXQ7Z2E3 356 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 TMPRSS11BQ86T26 416 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 KBTBD6Q86V97 674 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 SPATA6LQ8N4H0 392 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 MAFAQ8NHW3 353 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 PAK6Q9NQU5 681 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 UBXN8O00124 270 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 NELL1Q92832 810 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CENPTQ96BT3 561 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CAB39LQ9H9S4 337 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 TTC24A2A3L6 582 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 ERAL1O75616 437 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 ITPKAP23677 461 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 RPL26P61254 145 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CYP2U1Q7Z449 544 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 LINC00597Q9H2U6 94 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 VPS4AQ9UN37 437 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 RPL26L1Q9UNX3 145 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 TCRBV7S2A1N4TA0A589 114 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 A8MU76 341 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 TULP3O75386 442 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 EPORP19235 508 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CRATP43155 626 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CYP4F2P78329 520 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 GSTA3Q16772 222 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 DHFR2Q86XF0 187 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 CKAP2Q8WWK9 683 aa16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 LEF1Q9UJU2 399 aaPredicted RBP16.26■□□□□ 0.19
SMARCA4-201ENST00000344626 HDAC3O15379 428 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 DCXO43602 365 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 BEST1O76090 585 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 CEBPBP17676 345 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 RAD23AP54725 363 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 NAE1Q13564 534 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 RTL10Q7L3V2 364 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 PIF1Q9H611 641 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 PCDH12Q9NPG4 1184 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 SNX13Q9Y5W8 968 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 HLA-DQB2P05538 268 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 ALPIP09923 528 aa16.25■□□□□ 0.19
SMARCA4-201ENST00000344626 PBX2P40425 430 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms