RNA–Protein interactions for RNA: ENST00000344604.9

ECM2-201, Transcript of extracellular matrix protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-201ENST00000344604 PCDHA6Q9UN73 950 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 PLLPQ9Y342 182 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 PCDHA8Q9Y5H6 950 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 C5orf42Q9H799 3197 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 FAM205CA6NFA0 338 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 GGPS1O95749 300 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ALBP02768 609 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ZNF286BP0CG31 522 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 SLC15A1P46059 708 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 HTR3AP46098 478 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 OAZ1P54368 228 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 MRPS22P82650 360 aaKnown RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 ZNF169Q14929 603 aaPredicted RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 RUNDC3AQ59EK9 446 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 BHLHB9Q6PI77 547 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 GPRIN3Q6ZVF9 776 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 CTAGE3PQ8IX95 158 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 DMRTC2Q8IXT2 367 aaPredicted RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 ARFGAP1Q8N6T3 406 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 BPIFB6Q8NFQ5 453 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 DEPDC1BQ8WUY9 529 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 HEXDCQ8WVB3 486 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 PDXPQ96GD0 296 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 GLT1D1Q96MS3 346 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 CMTM6Q9NX76 183 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ASH2LQ9UBL3 628 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ZFR2Q9UPR6 939 aaKnown RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 CHD7Q9P2D1 2997 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 FOCADQ5VW36 1801 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 E2F8A0AVK6 867 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 HACD1B0YJ81 288 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 SLC22A2O15244 555 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 PRPF4O43172 522 aaKnown RBP eCLIP9.37□□□□□ -0.91
ECM2-201ENST00000344604 TDP2O95551 362 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 LDOC1O95751 146 aaPredicted RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 CSF2RAP15509 400 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 MATN1P21941 496 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ZNF45Q02386 682 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 PTGDRQ13258 359 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 LRRC41Q15345 812 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 DDR2Q16832 855 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 BROXQ5VW32 411 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 TPGS2Q68CL5 300 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 LHX8Q68G74 356 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 LGI2Q8N0V4 545 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 OXR1Q8N573 874 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 XXYLT1Q8NBI6 393 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 PNPT1Q8TCS8 783 aaKnown RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 PDCD2LQ9BRP1 358 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 MIR1-1HGQ9H1L0 117 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ASB7Q9H672 318 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 ITM2CQ9NQX7 267 aa9.37□□□□□ -0.91
ECM2-201ENST00000344604 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.37□□□□□ -0.91
ECM2-201ENST00000344604 PHGDHO43175 533 aaKnown RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 HS6ST1O60243 411 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 TTC4O95801 387 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 PTTG1O95997 202 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 S100A9P06702 114 aaKnown RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 ZNF865P0CJ78 1059 aaPredicted RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 CYBAP13498 195 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 MSH3P20585 1137 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 HOXC12P31275 282 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 ARCN1P48444 511 aaKnown RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 PPP3CCP48454 512 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 NOVP48745 357 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 SPCS3P61009 180 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 KCNAB2Q13303 367 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 ASTE1Q2TB18 679 aaPredicted RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 HSDL1Q3SXM5 330 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 LYSMD2Q8IV50 215 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 RCOR2Q8IZ40 523 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 MFSD4AQ8N468 514 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 GLIS1Q8NBF1 620 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 ERGIC2Q96RQ1 377 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 VRK1Q99986 396 aaPredicted RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 MANSC1Q9H8J5 431 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 GPN2Q9H9Y4 310 aaPredicted RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 LRRC4Q9HBW1 653 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 PXMP2Q9NR77 195 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 CNTNAP5Q8WYK1 1306 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 C7orf72A4D263 438 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 MEIS2O14770 477 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 TBX1O43435 398 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 TXNDC11Q6PKC3 985 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 FRMD5Q7Z6J6 570 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 ASPGQ86U10 573 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 SHISA4Q96DD7 197 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 SPATA33Q96N06 139 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 BCL7BQ9BQE9 202 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 FRMD8P1Q9BZ68 369 aaPredicted RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 ILKAPQ9H0C8 392 aaPredicted RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 ALG13Q9NP73 1137 aaKnown RBP9.36□□□□□ -0.91
ECM2-201ENST00000344604 SNX15Q9NRS6 342 aa9.36□□□□□ -0.91
ECM2-201ENST00000344604 COPG2Q9UBF2 871 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms