RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SMOC2Q9H3U7 446 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ARMC7Q9H6L4 198 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CAPN10Q9HC96 672 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KLHL28Q9NXS3 571 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 PTTG2Q9NZH5 202 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 H6PDO95479 791 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 FTH1P02794 183 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 UMPSP11172 480 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ACVRL1P37023 503 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 RPIAP49247 311 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 TRAF3Q13114 568 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KRR1Q13601 381 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 DOK6Q6PKX4 331 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 OR8H2Q8N162 312 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ZNF614Q8N883 585 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SIDT2Q8NBJ9 832 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 CLP1Q92989 425 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 C8orf4Q9NR00 106 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 GKN1Q9NS71 199 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KCTD5Q9NXV2 234 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 GALNT8Q9NY28 637 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 GON4LQ3T8J9 2241 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 COL2A1P02458 1487 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 MYH8P13535 1937 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 TRAV19A0A0A6YYK7 116 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 SPATA31D3P0C874 917 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 THRBP10828 461 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SELPP16109 830 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 RGS21Q2M5E4 152 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CCDC92Q53HC0 331 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 ARMC4Q5T2S8 1044 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 LYPLAL1Q5VWZ2 237 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CHADLQ6NUI6 762 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SPATA31D4Q6ZUB0 917 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SAPCD2Q86UD0 394 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SERPINA9Q86WD7 417 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 PROX1Q92786 737 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CYP2S1Q96SQ9 504 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CCDC106Q9BWC9 280 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CFAP97Q9P2B7 532 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KIF13AQ9H1H9 1805 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 RGPD5Q99666 1765 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 IQCF5A8MTL0 148 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 EI24O14681 340 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CYP4B1P13584 511 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 AQP1P29972 269 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 RXRGP48443 463 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 AP1S1P61966 158 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 LPIN1Q14693 890 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CNPY1Q3B7I2 92 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 CCDC149Q6ZUS6 474 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 PIM3Q86V86 326 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 AMER2Q8N7J2 671 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 OR10A6Q8NH74 314 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 PKP2Q99959 881 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 NUAK2Q9H093 628 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ASAH2Q9NR71 780 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 GIMAP2Q9UG22 337 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KLHL3Q9UH77 587 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 FCF1Q9Y324 198 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 DCLK1O15075 740 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 RNASEH1O60930 286 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 KCNQ1P51787 676 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 GRB14Q14449 540 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 GIPC3Q8TF64 312 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KBTBD7Q8WVZ9 684 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 POP5Q969H6 163 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 TSGA13Q96PP4 275 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 TDRD1Q9BXT4 1180 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 ZBTB26Q9HCK0 441 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 DNAJC11Q9NVH1 559 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 INTS10Q9NVR2 710 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 SELENONQ9NZV5 590 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 FNIP2Q9P278 1114 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 MAPRE3Q9UPY8 281 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ANKDD1BA6NHY2 528 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 G3V2T6 193 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 BCAS2O75934 225 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 SEC24AO95486 1093 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 NADKO95544 446 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 EOMESO95936 686 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 MTHFD1P11586 935 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 TRAP1Q12931 704 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 NR1D2Q14995 579 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 FAM174BQ3ZCQ3 159 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 PRSS55Q6UWB4 352 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 AHI1Q8N157 1196 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 TXNDC5Q8NBS9 432 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 ASZ1Q8WWH4 475 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 NELL1Q92832 810 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 ZHX1-C8orf76Q96EF9 292 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 SLC2A13Q96QE2 648 aa7.13□□□□□ -1.27
VCAN-202ENST00000342785 KIAA1522Q9P206 1035 aaPredicted RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 CDV3Q9UKY7 258 aaKnown RBP7.13□□□□□ -1.27
VCAN-202ENST00000342785 PDLIM1O00151 329 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 IL4RP24394 825 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 HNF4AP41235 474 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 MTHFRP42898 656 aa7.12□□□□□ -1.27
VCAN-202ENST00000342785 MTPNP58546 118 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms