RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FAM96AQ9H5X1 160 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 ARNT2Q9HBZ2 717 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 DIABLOQ9NR28 239 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 TAS2R7Q9NYW3 318 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 CCDC59Q9P031 241 aaKnown RBP9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 CD300AQ9UGN4 299 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 GGA1Q9UJY5 639 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 HSPE1-MOB4S4R3N1 261 aa9.6□□□□□ -0.87
PTCHD4-201ENST00000339488 THSD7AQ9UPZ6 1657 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 CDK5RAP2Q96SN8 1893 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 A0A1W2PP18 115 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 METTL15A6NJ78 407 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 DFNA5O60443 496 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SLC22A5O76082 557 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 NDUFB10O96000 172 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 LCKP06239 509 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 TAL1P17542 331 aaPredicted RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SAT1P21673 171 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 TYK2P29597 1187 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 HMGCLP35914 325 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 MASP1P48740 699 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 GDI2P50395 445 aaKnown RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 PPP4CP60510 307 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 TP53BP2Q13625 1128 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF273Q14593 569 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ARMC4Q5T2S8 1044 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 PNCKQ6P2M8 343 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 DRICH1Q6PGQ1 229 aaPredicted RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 MCOLN3Q8TDD5 553 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 CLEC4DQ8WXI8 215 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 KLHL15Q96M94 604 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 OR2A14Q96R47 310 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 EYA3Q99504 573 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 KCNS3Q9BQ31 491 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 FAM49AQ9H0Q0 323 aaPredicted RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 RSAD1Q9HA92 442 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 CASS4Q9NQ75 786 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 B3GNT2Q9NY97 397 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 EMC3Q9P0I2 261 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ATP6AP2A0A1C7CYW4 349 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SLC15A5A6NIM6 579 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SLC1A7O00341 560 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ADAM11O75078 769 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SOAT2O75908 522 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ITGA2P17301 1181 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 PRKCHP24723 683 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 PTP4A2Q12974 167 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 TRIP4Q15650 581 aaPredicted RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 GRIK4Q16099 956 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 HYIQ5T013 277 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 DARS2Q6PI48 645 aaKnown RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF767PQ75MW2 155 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 MON1BQ7L1V2 547 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 CELF6Q96J87 481 aaKnown RBP9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 Q96MT0 163 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SPOCK3Q9BQ16 436 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 SH2D3AQ9BRG2 576 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 GMPPBQ9Y5P6 360 aa9.59□□□□□ -0.87
PTCHD4-201ENST00000339488 ZFC3H1O60293 1989 aaKnown RBP9.59□□□□□ -0.88
PTCHD4-201ENST00000339488 MRPS14O60783 128 aaKnown RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ZNF623O75123 536 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ADRB2P07550 413 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RNF224P0DH78 156 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 CD36P16671 472 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 NPR3P17342 541 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 TFEBP19484 476 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 CD9P21926 228 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RPL9P32969 192 aaKnown RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 GZMKP49863 264 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ALFQ53S48 1182 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ZC3H12BQ5HYM0 836 aaKnown RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ODR4Q5SWX8 454 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 C17orf107Q6ZR85 190 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RFX6Q8HWS3 928 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RDH11Q8TC12 318 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 FOXJ1Q92949 421 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 YIPF6Q96EC8 236 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 MFSD3Q96ES6 412 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 SPATA9Q9BWV2 254 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 TTYH1Q9H313 450 aaPredicted RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 NECTIN3Q9NQS3 549 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 GPRC5BQ9NZH0 403 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 STON1Q9Y6Q2 735 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 NRCAMQ92823 1304 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 LOC110117498-PIK3R3F6TDL0 507 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 F8W036 122 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 H0YC42 278 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 DSCR3O14972 297 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 OGTO15294 1046 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 KPNA6O60684 536 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RECQL5O94762 991 aaPredicted RBP9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 LYPLA2O95372 231 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 FHP07954 510 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 BMP1P13497 986 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 ZNF30P17039 623 aa9.58□□□□□ -0.88
PTCHD4-201ENST00000339488 RFC2P35250 354 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 308.6 ms