RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 RPS3P23396 243 aaKnown RBP eCLIP9.43□□□□□ -0.96e-6■■■□□ 17.9
C11orf54-201ENST00000331239 CNR2P34972 360 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 DPP6P42658 865 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 WASP42768 502 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 LEPRP48357 1165 aaKnown RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 TPMTP51580 245 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 XIAPP98170 497 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 FASTKD1Q53R41 847 aaKnown RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 CWF19L1Q69YN2 538 aaKnown RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 ESRP1Q6NXG1 681 aaKnown RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 LCA5Q86VQ0 697 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 HORMAD1Q86X24 394 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 C2CD4AQ8NCU7 369 aaPredicted RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 FAM13CQ8NE31 585 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 FCRL3Q96P31 734 aaPredicted RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 FOXQ1Q9C009 403 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 EPHX3Q9H6B9 360 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 C20orf96Q9NUD7 363 aaPredicted RBP9.43□□□□□ -0.9
C11orf54-201ENST00000331239 LNPEPQ9UIQ6 1025 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 HS3ST3A1Q9Y663 406 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 ARL5AQ9Y689 179 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 SLC30A1Q9Y6M5 507 aa9.43□□□□□ -0.9
C11orf54-201ENST00000331239 GLYATL1P3A0A0U1RQE8 302 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 NEMP1O14524 444 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CD3EAPO15446 510 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 DIAPH2O60879 1101 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 RNASEH2AO75792 299 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 TGDSO95455 350 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 RPSAP08865 295 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 SNRPAP09012 282 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 C1SP09871 688 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 ALPIP09923 528 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 BPIP17213 487 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CTPS1P17812 591 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 BGNP21810 368 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 LHCGRP22888 699 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 PTPN4P29074 926 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 ADPRHP54922 357 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 TAS2R38P59533 333 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 OLIG2Q13516 323 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 GAS6Q14393 721 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 ZNF284Q2VY69 593 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 HENMT1Q5T8I9 393 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 TEDDM1Q5T9Z0 273 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 ADAMTSL4Q6UY14 1074 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 PACS1Q6VY07 963 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 WDR5BQ86VZ2 330 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 LONP2Q86WA8 852 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 HDAC10Q969S8 669 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 MFSD3Q96ES6 412 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CATSPERZQ9NTU4 200 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 POLR3BQ9NW08 1133 aaPredicted RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 ZFATQ9P243 1243 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 KLF11O14901 512 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 LATO43561 262 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 KRT38O76015 456 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 SRP72O76094 671 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 AP2A2O94973 939 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 VAPBO95292 243 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CD6P30203 668 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 SPRP35270 261 aaPredicted RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 GP5P40197 560 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CCNFP41002 786 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 PTGER3P43115 390 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 NUMBP49757 651 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 ARFIP2P53365 341 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CLNS1AP54105 237 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 LDLRAP1Q5SW96 308 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 FAM182AQ5T1J6 154 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 TIFABQ6ZNK6 161 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 Q6ZS52 159 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 SKA1Q96BD8 255 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 DNAJC1Q96KC8 554 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 SPACA7Q96KW9 195 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 MCMBPQ9BTE3 642 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 TMEM120AQ9BXJ8 343 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 IL26Q9NPH9 171 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 MKS1Q9NXB0 559 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 MTO1Q9Y2Z2 717 aaKnown RBP9.42□□□□□ -0.9
C11orf54-201ENST00000331239 PCDHB1Q9Y5F3 818 aa9.42□□□□□ -0.9
C11orf54-201ENST00000331239 CUL9Q8IWT3 2517 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 IGLV3-16A0A075B6K0 115 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 A0A1W2PP55 124 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 CCDC162PA2VCL2 907 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 CXorf49A8MYA2 514 aaPredicted RBP9.41□□□□□ -0.9
C11orf54-201ENST00000331239 DNAJC6O75061 913 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 PEX11AO75192 247 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 C6P13671 934 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 ARNTP27540 789 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 CRADDP78560 199 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 MTAPQ13126 283 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 SGCGQ13326 291 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 NFATC2Q13469 925 aa9.41□□□□□ -0.9
C11orf54-201ENST00000331239 USP39Q53GS9 565 aaKnown RBP9.41□□□□□ -0.9
C11orf54-201ENST00000331239 SETMARQ53H47 684 aaPredicted RBP9.41□□□□□ -0.9
C11orf54-201ENST00000331239 KIAA1324Q6UXG2 1013 aaKnown RBP9.41□□□□□ -0.9
C11orf54-201ENST00000331239 DCP2Q8IU60 420 aaKnown RBP9.41□□□□□ -0.9
C11orf54-201ENST00000331239 CILP2Q8IUL8 1156 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms