RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SMG8Q8ND04 991 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 APOLD1Q96LR9 279 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 KCNS3Q9BQ31 491 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 KAT8Q9H7Z6 458 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 VPS51Q9UID3 782 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 KDM4FA0A1W2PPD8 638 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 PRRG1O14668 218 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 OTCP00480 354 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 CTPS1P17812 591 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 MYL12AP19105 171 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 SLC5A2P31639 672 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 RPL26P61254 145 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 FKBP1AP62942 108 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 PLET1Q6UQ28 207 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 PLPPR4Q7Z2D5 763 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 FIBCD1Q8N539 461 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 COPS4Q9BT78 406 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 CLEC4MQ9H2X3 399 aaPredicted RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 EIF2B3Q9NR50 452 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 SIX4Q9UIU6 781 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 ERGIC3Q9Y282 383 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 PRORSD1PA6NEY8 169 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 EFCAB9A8MZ26 197 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 PSIP1O75475 530 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 RPS12P25398 132 aaKnown RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 HSPA7P48741 367 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 ATP6V0D1P61421 351 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 VBP1P61758 197 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 PITX1P78337 314 aaPredicted RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 HFE2Q6ZVN8 426 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 OLFM1Q99784 485 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 MAGEE1Q9HCI5 957 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 MAP10Q9P2G4 905 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 RPS6KA6Q9UK32 745 aa13.95□□□□□ -0.18
EPHB3-201ENST00000330394 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.95□□□□□ -0.18
EPHB3-201ENST00000330394 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 CCDC162PA2VCL2 907 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 IQCF5A8MTL0 148 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SOCS2O14508 198 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SDHDO14521 159 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 XPNPEP2O43895 674 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 PDE9AO76083 593 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 DIRAS1O95057 198 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SERPINA1P01009 418 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 NKX2-5P52952 324 aaPredicted RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 DIO3P55073 304 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 CDC42P60953 191 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 BEX3Q00994 111 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SPIBQ01892 262 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 NPTX1Q15818 432 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 FAM131AQ6UXB0 335 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SPATA19Q7Z5L4 167 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 TLR8Q9NR97 1041 aaKnown RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 KNL1Q8NG31 2342 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 MYBPHLA2RUH7 354 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SLC22A2O15244 555 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 GABBR2O75899 941 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 TSPAN9O75954 239 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SNX4O95219 450 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 IFNA14P01570 189 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 GPR15P49685 360 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 ZNF135P52742 658 aaPredicted RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 MBTD1Q05BQ5 628 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 NFE2Q16621 373 aaPredicted RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 OR6K2Q8NGY2 324 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 PHF10Q8WUB8 498 aaKnown RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 GFM1Q96RP9 751 aaKnown RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 GPR22Q99680 433 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SERHL2Q9H4I8 314 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SERHLQ9NQF3 203 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 MOCS1Q9NZB8 636 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SLC9A8Q9Y2E8 581 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 PTGDR2Q9Y5Y4 395 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 PRKD3O94806 890 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 ARPC4P59998 168 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 ZNF423Q2M1K9 1284 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 DCLRE1AQ6PJP8 1040 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 SLC2A7Q6PXP3 512 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 EIF3MQ7L2H7 374 aaKnown RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 ANKLE1Q8NAG6 615 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 C17orf50Q8WW18 174 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 TDRD1Q9BXT4 1180 aaKnown RBP13.94□□□□□ -0.18
EPHB3-201ENST00000330394 ZYG11BQ9C0D3 744 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 IPPKQ9H8X2 491 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 C8orf4Q9NR00 106 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 GALPQ9UBC7 116 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 PCDHB9Q9Y5E1 797 aa13.94□□□□□ -0.18
EPHB3-201ENST00000330394 PCP4L1A6NKN8 68 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 A8MV72 311 aaPredicted RBP13.93□□□□□ -0.18
EPHB3-201ENST00000330394 TLR5O60602 858 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 SEMA3DO95025 777 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 RAP2AP10114 183 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 TYMPP19971 482 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 MC4RP32245 332 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 FEN1P39748 380 aaKnown RBP13.93□□□□□ -0.18
EPHB3-201ENST00000330394 CNTN1Q12860 1018 aa13.93□□□□□ -0.18
EPHB3-201ENST00000330394 HIST2H2ACQ16777 129 aaPredicted RBP13.93□□□□□ -0.18
EPHB3-201ENST00000330394 PRAMEF19Q5SWL8 479 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms