RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 BOCQ9BWV1 1114 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LRRC3Q9BY71 257 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CDH19Q9H159 772 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CATSPERZQ9NTU4 200 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 DNAAF2Q9NVR5 837 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 OXSMQ9NWU1 459 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 GIMAP2Q9UG22 337 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 IKZF3Q9UKT9 509 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 TRAV19A0A0A6YYK7 116 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 C1orf232A0A0U1RR37 186 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LINC01553A4QN01 128 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 FAM149AA5PLN7 773 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 STX7O15400 261 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 MTX2O75431 263 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SRP72O76094 671 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SUPT7LO94864 414 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 MPOP05164 745 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CR2P20023 1033 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 ARL1P40616 181 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CREB5Q02930 508 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CBLBQ13191 982 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 UGP2Q16851 508 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 GEN1Q17RS7 908 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CCDC153Q494R4 210 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 MTX3Q5HYI7 312 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SH2D4BQ5SQS7 431 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LY6G5CQ5SRR4 150 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 DUS1LQ6P1R4 473 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 AAGABQ6PD74 315 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 BNC2Q6ZN30 1099 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 Q6ZVU0 165 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LCA5Q86VQ0 697 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 OR9I1Q8NGQ6 314 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SPPL3Q8TCT6 385 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LRTOMTQ8WZ04 291 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 EME1Q96AY2 570 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 HBEGFQ99075 208 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 RAD9AQ99638 391 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CIPCQ9C0C6 399 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 ZDHHC6Q9H6R6 413 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 LSM7Q9UK45 103 aaKnown RBP7.56□□□□□ -1.2
TRIM55-202ENST00000315962 SNX13Q9Y5W8 968 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 V9GYQ6 96 aa7.56□□□□□ -1.2
TRIM55-202ENST00000315962 C7orf72A4D263 438 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 C2orf81A6NN90 581 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 UBXN8O00124 270 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 AP3B1O00203 1094 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 NDUFS3O75489 264 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 STAMBPO95630 424 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 IL1BP01584 269 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MT-ND1P03886 318 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 FGF1P05230 155 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 HLA-DPA1P20036 260 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 LEPRP48357 1165 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CLCN4P51793 760 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ECT2LQ008S8 904 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TIAL1Q01085 375 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TNK2Q07912 1038 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PDAP1Q13442 181 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ART3Q13508 389 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PPP1R3AQ16821 1122 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TCEAL5Q5H9L2 206 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 OGFRL1Q5TC84 451 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 APLFQ8IW19 511 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CNTN4Q8IWV2 1026 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 HJURPQ8NCD3 748 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 NCSTNQ92542 709 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ALG14Q96F25 216 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 FEM1CQ96JP0 617 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 GPR21Q99679 349 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PRKD2Q9BZL6 878 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 WDR41Q9HAD4 459 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 LHX3Q9UBR4 397 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PSMD13Q9UNM6 376 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 OR51B4Q9Y5P0 310 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 DOCK4Q8N1I0 1966 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 A0A0J9YVX5 310 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 BOLA2-SMG1P6H3BVE0 249 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CDC7O00311 574 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 SUPT3HO75486 399 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 RPP40O75818 363 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 RHOBTB1O94844 696 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 UGT2B4P06133 528 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 CDK4P11802 303 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 RFC2P35250 354 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MAGEA12P43365 314 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 PSMD7P51665 324 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 C1QTNF8P60827 252 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 HPCAP84074 193 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ADGRE1Q14246 886 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 GRM2Q14416 872 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 TBCCQ15814 346 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 FAM83EQ2M2I3 478 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 C18orf21Q32NC0 220 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 ANKDD1AQ495B1 522 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 KCTD21Q4G0X4 260 aa7.55□□□□□ -1.2
TRIM55-202ENST00000315962 RARS2Q5T160 578 aaKnown RBP7.55□□□□□ -1.2
TRIM55-202ENST00000315962 MRNIPQ6NTE8 343 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms