RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ANXA9O76027 345 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 SLC25A14O95258 325 aaPredicted RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 GPR89BP0CG08 455 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 HGFP14210 728 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 HOXB3P14651 431 aaPredicted RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 BRAFP15056 766 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 ACTN2P35609 894 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 SPAM1P38567 509 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 INHBCP55103 352 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 UBE2IP63279 158 aaKnown RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 XIAPP98170 497 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 TLE3Q04726 772 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 C16orf72Q14CZ0 275 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 SIX1Q15475 284 aaPredicted RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 OASLQ15646 514 aaKnown RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 CHRNA6Q15825 494 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 CCDC181Q5TID7 509 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 DARS2Q6PI48 645 aaKnown RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 GLT6D1Q7Z4J2 308 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 PHYKPLQ8IUZ5 450 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 LSMEM2Q8N112 164 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 UBL4BQ8N7F7 174 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 FAM71DQ8N9W8 422 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 DDHD1Q8NEL9 900 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 WDR36Q8NI36 951 aaKnown RBP14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 ATG4AQ8WYN0 398 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 TMEM9Q9P0T7 183 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 FAM208BQ5VWN6 2430 aa14.41□□□□□ -0.1
PPP1CA-201ENST00000312989 IGSF10Q6WRI0 2623 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 AGAP14A8MT82 685 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 SGTAO43765 313 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A9O60656 530 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A6P19224 532 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A1P22309 533 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A4P22310 534 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A3P35503 534 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A5P35504 534 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 ETV5P41161 510 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 GPR3P46089 330 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 ARSDP51689 593 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 ZNF140P52738 457 aaPredicted RBP14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 CTSCP53634 463 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 MEI1Q5TIA1 1274 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 NKAIN2Q5VXU1 208 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 CCDC70Q6NSX1 233 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 CRTC3Q6UUV7 619 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 ZNF761Q86XN6 746 aaPredicted RBP14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 LRRC8AQ8IWT6 810 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 SPACA3Q8IXA5 215 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 DCBLD2Q96PD2 775 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 FSD1LQ9BXM9 530 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 PRORYQ9H606 182 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A7Q9HAW7 530 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A10Q9HAW8 530 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 UGT1A8Q9HAW9 530 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 EPB41L5Q9HCM4 733 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 PRDM8Q9NQV8 689 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 PDP2Q9P2J9 529 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 GUCA1BQ9UMX6 200 aa14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 URB1O60287 2271 aaKnown RBP14.4□□□□□ -0.1
PPP1CA-201ENST00000312989 ARHGEF17Q96PE2 2063 aaPredicted RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TRBV23OR9-2A0A075B6M9 112 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 GLYATL1P3A0A0U1RQE8 302 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 PLD2O14939 933 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 LDB2O43679 373 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 VEGFDO43915 354 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 CPNE6O95741 557 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 ITGA2BP08514 1039 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 F3P13726 295 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 ITIH1P19827 911 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 MLLT3P42568 568 aaPredicted RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 EIF3IQ13347 325 aaKnown RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TAF1AQ15573 450 aaPredicted RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 CLPPQ16740 277 aaPredicted RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 GPRC6AQ5T6X5 926 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 FAM151BQ6UXP7 276 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 RAB11FIP2Q7L804 512 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 PDZD3Q86UT5 571 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TXLNBQ8N3L3 684 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 RASGEF1AQ8N9B8 481 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TTC13Q8NBP0 860 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TMEM74Q96NL1 305 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TIMM29Q9BSF4 260 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TMEM121Q9BTD3 319 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 TSGA10Q9BZW7 698 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 SARS2Q9NP81 518 aaKnown RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 ZNF624Q9P2J8 865 aaPredicted RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 ACSL6Q9UKU0 697 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 AAR2Q9Y312 384 aaKnown RBP14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 MGAQ8IWI9 3026 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 ADAMTS20P59510 1910 aa14.39□□□□□ -0.11
PPP1CA-201ENST00000312989 IGHV5-10-1A0A0J9YXX1 117 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 RHPN2P1A8MT19 583 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 LIASO43766 372 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PPFIA2O75334 1257 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 TNFSF15O95150 251 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 THRAP10827 490 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 PSMA3P25788 255 aa14.38□□□□□ -0.11
PPP1CA-201ENST00000312989 ALDH4A1P30038 563 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms