RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CEP250Q9BV73 2442 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PLCH1Q4KWH8 1693 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MARF1Q9Y4F3 1742 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SCN4AP35499 1836 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 E2F8A0AVK6 867 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KLRG2A4D1S0 409 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PROM1O43490 865 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LAMTOR5O43504 91 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 UGT2B17O75795 530 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NPPAP01160 153 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ALDOAP04075 364 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GNPDA1P46926 289 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TOB1P50616 345 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CCR8P51685 355 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CLCN7P51798 805 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MELKQ14680 651 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SMCO1Q147U7 214 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SLC9B1Q4ZJI4 515 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RAP1GAP2Q684P5 730 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MED27Q6P2C8 311 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZBTB49Q6ZSB9 765 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NUP54Q7Z3B4 507 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ARNTL2Q8WYA1 636 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MYDGFQ969H8 173 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PHF21BQ96EK2 531 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PLEKHA1Q9HB21 404 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GEMIN8Q9NWZ8 242 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CRNNQ9UBG3 495 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EPHA6Q9UF33 1036 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 FBXO5Q9UKT4 447 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NOX1Q9Y5S8 564 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ASCC3Q8N3C0 2202 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 BRWD1Q9NSI6 2320 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HYKKA2RU49 373 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MAGEA13PA6NCF6 341 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CHURC1-FNTBB4DL54 471 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 AGPSO00116 658 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SNX4O95219 450 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 AP2A1O95782 977 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TACSTD2P09758 323 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ACTR1BP42025 376 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RFX3P48380 749 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 C9orf64Q5T6V5 341 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LCN1P1Q5VSP4 162 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 BROXQ5VW32 411 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RNF43Q68DV7 783 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GDPD4Q6W3E5 623 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TEX47Q8TBZ9 253 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 FBXO25Q8TCJ0 367 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NAT6Q93015 286 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PPCDCQ96CD2 204 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ANKHQ9HCJ1 492 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NUDT4Q9NZJ9 180 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 IFT80Q9P2H3 777 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CPNE7Q9UBL6 633 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PACSIN3Q9UKS6 424 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RBM7Q9Y580 266 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TIMM13Q9Y5L4 95 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MAST2Q6P0Q8 1798 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 STX16-NPEPL1H3BU86 382 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 STX16O14662 325 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZBTB39O15060 712 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TULP3O75386 442 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SKAP2O75563 359 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CPSF4O95639 269 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 OXSR1O95747 527 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 APOC1P02654 83 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 FESP07332 822 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PABPC4LP0CB38 370 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PBLDP30039 288 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KIR3DL1P43629 444 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF33BQ06732 778 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PFKFB4Q16877 469 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GPAT3Q53EU6 434 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 AGKQ53H12 422 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PRAMEF19Q5SWL8 479 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TAS1R3Q7RTX0 852 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SNX20Q7Z614 316 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TICAM1Q8IUC6 712 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HDAC2Q92769 488 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SEMA6BQ9H3T3 888 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PDE7BQ9NP56 450 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DDX4Q9NQI0 724 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MOCS1Q9NZB8 636 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZMYND8Q9ULU4 1186 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GNEQ9Y223 722 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 FAM237BA0A1B0GVD1 139 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ATXN8OSP0DMR3 200 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ATP6V1B2P21281 511 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 PSMA1P25786 263 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 RPL10P27635 214 aaKnown RBP3.16□□□□□ -1.9
CLOCK-201ENST00000309964 S100A7P31151 101 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ELK3P41970 407 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 GRK6P43250 576 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 AQP5P55064 265 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 POLE2P56282 527 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TAS2R41P59536 307 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 TMED1Q13445 227 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 MYBPC3Q14896 1274 aa3.16□□□□□ -1.9
CLOCK-201ENST00000309964 ZCWPW2Q504Y3 356 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms