RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 AHCTF1Q8WYP5 2266 aa20.95■□□□□ 0.94
SMCO4-201ENST00000298966 ACSL3O95573 720 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 CD160O95971 181 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 CSF2P04141 144 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 PRNPP04156 253 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 SRCP12931 536 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 STX2P32856 288 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 CD86P42081 329 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 WNT3AP56704 352 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 RHOAP61586 193 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 DSC2Q02487 901 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 NIPAL4Q0D2K0 466 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 FZD2Q14332 565 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 FASTKD3Q14CZ7 662 aaKnown RBP20.94■□□□□ 0.94
SMCO4-201ENST00000298966 NR0B2Q15466 257 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 KLHL38Q2WGJ6 581 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 KYAT3Q6YP21 454 aaKnown RBP20.94■□□□□ 0.94
SMCO4-201ENST00000298966 ERN2Q76MJ5 926 aaKnown RBP20.94■□□□□ 0.94
SMCO4-201ENST00000298966 PARGQ86W56 976 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 PLPP6Q8IY26 295 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 RIBC1Q8N443 379 aaPredicted RBP20.94■□□□□ 0.94
SMCO4-201ENST00000298966 EXD3Q8N9H8 876 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 IPMKQ8NFU5 416 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 OR2W6PQ8NHA6 318 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 SPATA22Q8NHS9 363 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 WDR48Q8TAF3 677 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 MRGPRX2Q96LB1 330 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 BMFQ96LC9 184 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 ARHGAP9Q9BRR9 750 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 TMBIM4Q9HC24 238 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 LRRC4CQ9HCJ2 640 aa20.94■□□□□ 0.94
SMCO4-201ENST00000298966 ZC3H7BQ9UGR2 993 aaKnown RBP20.94■□□□□ 0.94
SMCO4-201ENST00000298966 DOPEY2Q9Y3R5 2298 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 CCDC187A0A096LP49 1063 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 SPTY2D1-AS1A0A0U1RR47 76 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 AQP9O43315 295 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 PMPCBO75439 489 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 MT-CYBP00156 380 aaPredicted RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 SHBGP04278 402 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 MMP2P08253 660 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 PGAM1P18669 254 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 MAXP61244 160 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 SRSF1Q07955 248 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 FRG1Q14331 258 aaKnown RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 GRM3Q14832 879 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 RASA2Q15283 850 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 TMEM259Q4ZIN3 620 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 UBAP2Q5T6F2 1119 aaKnown RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 AGBL2Q5U5Z8 902 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 ATG14Q6ZNE5 492 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 PCDH20Q8N6Y1 951 aaKnown RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 OR52K1Q8NGK4 314 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 OR2A12Q8NGT7 310 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 GLMNQ92990 594 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 FICDQ9BVA6 458 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 HDAC8Q9BY41 377 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 SLC17A9Q9BYT1 436 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 VPS37BQ9H9H4 285 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 MRM3Q9HC36 420 aaKnown RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 GPR27Q9NS67 375 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 LHX3Q9UBR4 397 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 ATXN7L1Q9ULK2 861 aaPredicted RBP20.93■□□□□ 0.94
SMCO4-201ENST00000298966 CHMP2BQ9UQN3 213 aa20.93■□□□□ 0.94
SMCO4-201ENST00000298966 LOC285095A0A1B0GVY8 99 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 PMS2P1A4D2B8 440 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 F5H423 210 aaPredicted RBP20.92■□□□□ 0.94
SMCO4-201ENST00000298966 TPP1O14773 563 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 IGSF6O95976 241 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 GSRP00390 522 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 FGF1P05230 155 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 ITGA2BP08514 1039 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 RABIFP47224 123 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 RPIAP49247 311 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 SNRPD1P62314 119 aaKnown RBP20.92■□□□□ 0.94
SMCO4-201ENST00000298966 DEFB133Q30KQ1 61 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 KRT71Q3SY84 523 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 STEAP4Q687X5 459 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 C3orf62Q6ZUJ4 267 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 USP53Q70EK8 1073 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 ANKMY2Q8IV38 441 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 GSDMBQ8TAX9 411 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 LMX1AQ8TE12 382 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 PPP1R16AQ96I34 528 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 RANBP9Q96S59 729 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 WDR83Q9BRX9 315 aaKnown RBP20.92■□□□□ 0.94
SMCO4-201ENST00000298966 STMN4Q9H169 189 aaPredicted RBP20.92■□□□□ 0.94
SMCO4-201ENST00000298966 MAD1L1Q9Y6D9 718 aa20.92■□□□□ 0.94
SMCO4-201ENST00000298966 FAM237BA0A1B0GVD1 139 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 POM121BA6NF01 834 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 HMGB1P1B2RPK0 211 aaPredicted RBP20.91■□□□□ 0.94
SMCO4-201ENST00000298966 TERTO14746 1132 aaKnown RBP20.91■□□□□ 0.94
SMCO4-201ENST00000298966 MUSKO15146 869 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 AVILO75366 819 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 PAK4O96013 591 aaPredicted RBP20.91■□□□□ 0.94
SMCO4-201ENST00000298966 MT-CO1P00395 513 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 POLBP06746 335 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 JUNDP17535 347 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 MGAT1P26572 445 aa20.91■□□□□ 0.94
SMCO4-201ENST00000298966 GRIA1P42261 906 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms