RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 NCBP2-AS2Q69YL0 99 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 GRIN2DO15399 1336 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 PAX7P23759 505 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SMIM11AP58511 58 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 TAF1AQ15573 450 aaPredicted RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 CDCA2Q69YH5 1023 aaPredicted RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 PARGQ86W56 976 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 RALGPS2Q86X27 583 aaPredicted RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 MPP5Q8N3R9 675 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 ZNF607Q96SK3 696 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 AIF1LQ9BQI0 150 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SPRTNQ9H040 489 aaPredicted RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 G3V2T6 193 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 TBX18O95935 607 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 ACRP10323 421 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 PPIBP23284 216 aaKnown RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 B3GNT6Q6ZMB0 384 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 FITM2Q8N6M3 262 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 FAM13CQ8NE31 585 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 BRSK1Q8TDC3 778 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 FUBP3Q96I24 572 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 PPM1MQ96MI6 270 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 HAPLN3Q96S86 360 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 MCMBPQ9BTE3 642 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 ZSCAN32Q9NX65 697 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 IRAK2O43187 625 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 SERPINB7O75635 380 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 NAE1Q13564 534 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 ZNF572Q7Z3I7 529 aaPredicted RBP17.12■□□□□ 0.33
CDCP1-201ENST00000296129 BANPQ8N9N5 519 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 S100A14Q9HCY8 104 aa17.12■□□□□ 0.33
CDCP1-201ENST00000296129 CHRNA4P43681 627 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 ITGA1P56199 1179 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 CAP1Q01518 475 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 PEX6Q13608 980 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 TXNRD3NBQ6F5E7 133 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 MYDGFQ969H8 173 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 TOR4AQ9NXH8 423 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 CLIC5Q9NZA1 410 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 LRP6O75581 1613 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 C8AP07357 584 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 LCP2Q13094 533 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 SPANXN2Q5MJ10 180 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 BEND7Q8N7W2 519 aaPredicted RBP17.11■□□□□ 0.33
CDCP1-201ENST00000296129 SLC38A2Q96QD8 506 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 FFAR2O15552 330 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 KELP23276 732 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 SEC13P55735 322 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 CCNYL2Q5T2Q4 361 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 PNPLA3Q9NST1 481 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 CORO1CQ9ULV4 474 aaPredicted RBP17.11■□□□□ 0.33
CDCP1-201ENST00000296129 TCRBV7S3A2A0A539 114 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 CYP4F3Q08477 520 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 SF1Q15637 639 aaKnown RBP17.11■□□□□ 0.33
CDCP1-201ENST00000296129 CFAP206Q8IYR0 622 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 DEPDC4Q8N2C3 294 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 Q96MT0 163 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 HEPHQ9BQS7 1158 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 OGDHLQ9ULD0 1010 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 KPNA4O00629 521 aaPredicted RBP17.11■□□□□ 0.33
CDCP1-201ENST00000296129 NELFEP18615 380 aaKnown RBP17.11■□□□□ 0.33
CDCP1-201ENST00000296129 BNIP1Q12981 228 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 FAM180AQ6UWF9 173 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 BCO2Q9BYV7 579 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 SLC17A6Q9P2U8 582 aa17.11■□□□□ 0.33
CDCP1-201ENST00000296129 TULP2O00295 520 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 AP3D1O14617 1153 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 FPGTO14772 594 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 IDH3AP50213 366 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 IL23RQ5VWK5 629 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 NAIF1Q69YI7 327 aaPredicted RBP17.1■□□□□ 0.33
CDCP1-201ENST00000296129 KLHL23Q8NBE8 558 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 OR14C36Q8NHC7 312 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 CENPXA8MT69 81 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 ENPP3O14638 875 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 SHOX2O60902 331 aaPredicted RBP17.1■□□□□ 0.33
CDCP1-201ENST00000296129 TSC22D2O75157 780 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 UROSP10746 265 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 CREB1P16220 341 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 CSKP41240 450 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 FSTL5Q8N475 847 aaPredicted RBP17.1■□□□□ 0.33
CDCP1-201ENST00000296129 KREMEN2Q8NCW0 462 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 NTAN1Q96AB6 310 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 KLHL32Q96NJ5 620 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 PIGVQ9NUD9 493 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 ZDHHC18Q9NUE0 388 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 PCDHGA4Q9Y5G9 962 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 JAK1P23458 1154 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 IRF9Q00978 393 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 TIMM50Q3ZCQ8 353 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.1■□□□□ 0.33
CDCP1-201ENST00000296129 CPNE9Q8IYJ1 553 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 PQLC1Q8N2U9 271 aa17.1■□□□□ 0.33
CDCP1-201ENST00000296129 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms